Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01017 atgaaAGGGCTAATcactttgattttgattctgGCGTTTGCTTCACCCCATTTATGTGTGGGGTTGAACCCAATAATCAAAGACACTTTCAACGTCATGGATTATGGTGCTGTTGGTGATGGCAAATCTGATGACTCCCAAGCAATTTCAAAGGCATGGAACGATACATGTGGAACTGCAATTCCTGGGGCTGCAACTCTTGTTTTACCCGGAGGAAAGACATTCTACTTGAAGCCAATGGATTTTCAGGGTTCTTGCAAGTCCAAATATATTAACATTCAGCTCATATTTATCCATGATTGCAATGATCTAACTATAAATGGTCTGAGGAACATTAATAGTCCAAGAAATCACATGGCCATACATTTCTGCAATGGTGTGAGAATCAACGATCTCCATATTCAAGCTCCTGGTAAGAGCCTTAACACAGATGGGATTAACATTGCTCTATCAACAAACATCAACATAGTAAATTCCTCCATAGCAACTGGTGATGATTGTATTTCCATACTTAATGGCACTTCTTTTGTCAATATCAGCGGGATTGCCTGTGGACCAGGCCATGgaataagCATTGGAAGCATTGGATCCAATACATCTTCTTATGACACAGTTAAAGAGGTGCATGTTCGAAATTGCAGCTTTAATGGCACTCTAAATGGCGTAAGAATCAAAACATCTcagGATAGAGTAGGCTATGTGGGGAAAGTCTCTTTTGAGGAACTCACAATGATAGCATCCCATCACCCCATCATTATAGACCAGCACTACTTCAACAAAGTAAATGAGACCGGGGTTGTAGCAGTGAATGTGACTGATATTACATTCCGTGGTATTCATGGAACTTGTGCTGATGAGAAAGCCATTGAGTTGAACTGCAACAAAAAGTTTGGTTGCCAAAATCTTATATTAGACAACATTAACTTAACCTCATCTGTTCCTGGAAAGAAGACAATTGCCTCTTGCTTCAATGCTCACGGAGTAGCTAAATCTGTTATTCCCAGTAACCCTTGCCTGCAAAAATG 1025 0.3912 MKGLITLILILAFASPHLCVGLNPIIKDTFNVMDYGAVGDGKSDDSQAISKAWNDTCGTAIPGAATLVLPGGKTFYLKPMDFQGSCKSKYINIQLIFIHDCNDLTINGLRNINSPRNHMAIHFCNGVRINDLHIQAPGKSLNTDGINIALSTNINIVNSSIATGDDCISILNGTSFVNISGIACGPGHGISIGSIGSNTSSYDTVKEVHVRNCSFNGTLNGVRIKTSQDRVGYVGKVSFEELTMIASHHPIIIDQHYFNKVNETGVVAVNVTDITFRGIHGTCADEKAIELNCNKKFGCQNLILDNINLTSSVPGKKTIASCFNAHGVAKSVIPSNPCLQK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01017 341 PANTHER - 21 95 - -
Bva02g01017 341 PANTHER - 96 339 - -
Bva02g01017 341 SUPERFAMILY Pectin lyase-like 24 339 IPR011050 -
Bva02g01017 341 ProSitePatterns Polygalacturonase active site. 181 194 IPR000743 GO:0004650|GO:0005975
Bva02g01017 341 Pfam Glycosyl hydrolases family 28 87 326 IPR000743 GO:0004650|GO:0005975
Bva02g01017 341 Gene3D - 24 91 IPR012334 -
Bva02g01017 341 Gene3D - 92 338 IPR012334 -
Bva02g01017 341 PANTHER - 21 95 - -
Bva02g01017 341 PANTHER - 96 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01017 Bva-Chr2 14473197 14477977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01017 1 327 Glycoside Hydrolase AT5G17200 36.165 7.68e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01017 K01184 - rcu:8287292 305.449