Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00794 ATGGATGATGGTCCTTGCAATTCCTACCCATGGCATATGGCAgtgaatataaatatgagTAATGAATCCATGCTTAGGAAAAGCCATCTTCCACTGCCCAAAACACAGCATCCTAGTTTGGTAGTTTTCCGAAATATGGGAAGACTTGTTAGTGTTGGATTTGGTATGGTGTTCCTTTTGATGAGTGAAATTGCAGAATTATGTTTGTGTGGCAGCTCAAACTCAAACATGGGCTGCGTAGAAGCAGAGAGGCAAGCGCTTCTCAAGTTTAAAGCAAGCTTCAATAATCCATCACAGGGGCTGCTTTCCACTTGGGAAGGCAATCACTGCTGCCAGTGGAAAGGGATAGCCTGCAACAACCTTACGGGACATGTCATCACCCTTAATCTCACTAATCCATGCTCCGCATTCGAATATGGATATGACAGGGAGCatcattattttgatgattctagTATTGATGATTTTGGTTTTCAAGAGTGTTATAACCGCTTTGTCCTTGATGCACAAAATGTCGATCCATCAATTATGCAGTTGAAGCATTTGACTAATTTGGATTTAAGCGACAATAACTTTCACGATAGTCCAATACCAATGTTTCTTGGTTCTATGACACAGCTAACTAATCTTTCTCTATCTGATGCTGGTTTTAGTGGGAGAATTCCCCAGAGTCTTGGAAACCTCACCAACTTGCTCCATCTTGATCTCAGTGAAAACTATTTATATGCAGATGAGGTTGGTTGGATTTCACAATTATCATCATTGCAACACCTTGACATGAGCGATGTTGAACTTGGAAAGGCACACAATTTGTTTCAGGTACTTAACTTAGTTCCTTCTCTGTTACAGATACACTTGAGACAATGTGGTCTTGCAAATTCATCCTTTCCTCATCATCCTATTAATCTCACAAATCTCACCAAAATTGAAGTCCTTGATCTTTCATCAAATGCACTTCAAGCTCCTTTTCTGGATGCCCTTCAAAACATGACTTCTGTTAGtgtcttccttctttcttataACAATCTGGACTCACTACCGTTATGGTTGGGCAAGTTTCATAACCTTGCGGAGCTATACTTTGACGGAAACAAAGTTGATGGTCGATTTCCTTTAGTTCTTCAAAACTTAACTTCCATTAAAGTTCTTGACCTTTCTAAGAATAATTTGAACTCAGTGCCATTATGGTTAGCTAATTTCAACAAACTTGTCCATCTTGATCTTTCCTTCTGCCAATTTCAAGGTTCAATTCCTAATGTTTTTCGAAGCATGACCTCCCTTACATTCCTGAACTTGCTCTGGAATAATCTTTTTTCAATTGTCCCATCATGGTTGGGTGAGTTAAAGAGTCTTGTCTTCCTCAACCTTGGGTCGAATAAATTGAGCAGTATAGAGGGTTCTCTATcatcaattttgaaaaacataTGTTCTTTAAAAGTGTTAGTTTTGTCTCATAACATGTTTCAAGGAGAAGCATTGGGAACATCTGAATTATATGGATGCACTAAATACAATTTACAGAGTTTGGATTTGAgtggaaataaatttaatgatagctTGCCTACTTGGTTAGGACAACTAAAAAATCTAAGATACCTTTATCTTGGATCAAATTCATTATCTGGTTCTATTCCCTCTTCCCTTggaaaattgtcaaaattagAAAGTCTAGAACTCTCTTCCAACTGTTTGAATGGGACAATTCCACATAGTCTTGGACAACTTGCAAATCTCCAATACCTTGATCTTGCTAATAACCATTTGGACCTAGGGatctttcttgattttcttgCACAACTTGTGAATCTAACAATCCTAAATCTCTCCAATAATAGTATCGATGGAGTACTTCCAAATGGCATTAGACAGTTTGCAAATCTACAAAAGCTCTATCTGCCATATAATAACTTTAATGGTCCCATTCCTTCTAGTCTTGGTCAACTTGTGAATCTAATGTACCTAGATCTCTCAAACAACCATTTTGTTGGTGTCATCCCTCCAAGTCTTGGTCAACTTGTAAATCTAACATCTCTTGATCTCTCAAATAACCGTTTTGATGGTGTCATTCCTCAAAGCCTTGGTCAACTTGTTAATCTAACATCACTTGATCTCTCAAATAACCATTTTGATGGTGTCATTCCTCAAAGTCTTGGTCAACTTGTAAATTTACAGTACCTCAATCTTTCAAGAAATAGTTTACATGGGAGCATTCCTAGTGTTGATAAACTTGAAGGTCTACGTGAGCTAGATCTTTCTTCAAACTCTCTAGAAGAAGCTCTTTCTGAAATGAAAGGATGTTCACGAAAGATACATTTCCATACAATGAACATTGCCAATAACCATATCGCAGGACCTCTTCCTGAAAATATTGGTGATATAATGCCTGAGTTATTTAGCTTGCTTCTAGGAAACAACCAGATAAATGGTTCAATACCAAACTCATTGTGCAAAATTGTCAACTTAGTCAATCTTGATCTCTCAAACAATACCTTATCTGGTGAAATACCAGATTGCTGGAAGATTAGCCAAATGCTTGAAGAGATAAATTTGTCATCCAACAATCTATCAGGTCATATTCCGAGTTCATTTGGGAATCTACCCTCATTGTTATGGTTGCATTTGAACAAAAACAATCTTCATGGGGAGATTccattctttttgaaaaattcaaagaaacttTTCATTTTGGATCTTGGTGAGAATCAATTCTCTGGTTTTATACCTTCATGGACTGGGGAGATGTTTTCTAAATTGCTAATCATTAGACTACGACAAAACAAGTTGAATGGTACCATTCCTTCAAAATTATGCCAACTCTCTGCACTACAAATATTGGACCTAGCAGACAACAATCTCATGGGTTCAATACCTGATTGCATAGGCAATCTTAGAGGAATGAGATACAGCAATCAGATTGTTGCAGAGTTTGCATCATCTCCGGAGCTTGCACTATCTCCAGAGCCTCAATGgaaagatgatgaagatgtGAAACAAGTCATGAAAGGAAGAGAATGGGACTATACTAGAAACTTGAAGCTTCTAGAGAATATGGATTTGTCAAAAAACAATTTGGAAGGATTAATTCCAGAAGggataattttattgacaGGATTACTTGGCCTAAACCTATCACACAATCGACTTAGTGGAGAGATCCCCATAAATATTGGAAACATGAAATCGCTTGAATCCTTTGATGTTTCCTATAACAAACTTTCAGGACCAATTCCAAATAGCATGCCTCAATTAACTTCATTGGAACACTTAAACTTGTCATATAATAACTTTTCAGGACCAATTCCTacagaaaatcaattttcaactCTTGATGaccaatataattatattggaAACCAACTTCTTTGTGGAGCTTCTCTACCAAAGAAGTGTGCAAATGATGGTTCTCATCAACTTCCAGGAAACAAAGGCTATAAGGAAGAGCATGACTCACAAAAAGTATGGTTTTACTTTGTCATAGCAATTGGCTATGCAGCTGGCTTTTGGGGAGTTATTGGGATTTTATTGATCAAGAAGAGTTGGAGGCTTGCTTGCTTCAGGTGGGTGGATCATGTAGCAGATGAATTGTGGATAACAATTTTCATGAAGGTAGCGAGGCTGAAGAGGATGATGCTATTGAAAAATGTTCATGAGTG 3653 0.3567 MDDGPCNSYPWHMAVNINMSNESMLRKSHLPLPKTQHPSLVVFRNMGRLVSVGFGMVFLLMSEIAELCLCGSSNSNMGCVEAERQALLKFKASFNNPSQGLLSTWEGNHCCQWKGIACNNLTGHVITLNLTNPCSAFEYGYDREHHYFDDSSIDDFGFQECYNRFVLDAQNVDPSIMQLKHLTNLDLSDNNFHDSPIPMFLGSMTQLTNLSLSDAGFSGRIPQSLGNLTNLLHLDLSENYLYADEVGWISQLSSLQHLDMSDVELGKAHNLFQVLNLVPSLLQIHLRQCGLANSSFPHHPINLTNLTKIEVLDLSSNALQAPFLDALQNMTSVSVFLLSYNNLDSLPLWLGKFHNLAELYFDGNKVDGRFPLVLQNLTSIKVLDLSKNNLNSVPLWLANFNKLVHLDLSFCQFQGSIPNVFRSMTSLTFLNLLWNNLFSIVPSWLGELKSLVFLNLGSNKLSSIEGSLSSILKNICSLKVLVLSHNMFQGEALGTSELYGCTKYNLQSLDLSGNKFNDSLPTWLGQLKNLRYLYLGSNSLSGSIPSSLGKLSKLESLELSSNCLNGTIPHSLGQLANLQYLDLANNHLDLGIFLDFLAQLVNLTILNLSNNSIDGVLPNGIRQFANLQKLYLPYNNFNGPIPSSLGQLVNLMYLDLSNNHFVGVIPPSLGQLVNLTSLDLSNNRFDGVIPQSLGQLVNLTSLDLSNNHFDGVIPQSLGQLVNLQYLNLSRNSLHGSIPSVDKLEGLRELDLSSNSLEEALSEMKGCSRKIHFHTMNIANNHIAGPLPENIGDIMPELFSLLLGNNQINGSIPNSLCKIVNLVNLDLSNNTLSGEIPDCWKISQMLEEINLSSNNLSGHIPSSFGNLPSLLWLHLNKNNLHGEIPFFLKNSKKLFILDLGENQFSGFIPSWTGEMFSKLLIIRLRQNKLNGTIPSKLCQLSALQILDLADNNLMGSIPDCIGNLRGMRYSNQIVAEFASSPELALSPEPQWKDDEDVKQVMKGREWDYTRNLKLLENMDLSKNNLEGLIPEGIILLTGLLGLNLSHNRLSGEIPINIGNMKSLESFDVSYNKLSGPIPNSMPQLTSLEHLNLSYNNFSGPIPTENQFSTLDDQYNYIGNQLLCGASLPKKCANDGSHQLPGNKGYKEEHDSQKVWFYFVIAIGYAAGFWGVIGILLIKKSWRLACFRWVDHVADELWITIFMKVARLKRMMLLKNVHE 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00794 1217 Gene3D Ribonuclease Inhibitor 742 1138 IPR032675 -
Bva02g00794 1217 ProSiteProfiles Leucine-rich repeat profile. 450 471 IPR001611 GO:0005515
Bva02g00794 1217 SUPERFAMILY L domain-like 371 705 - -
Bva02g00794 1217 Pfam Leucine rich repeat 206 262 IPR001611 GO:0005515
Bva02g00794 1217 Pfam Leucine rich repeat 650 709 IPR001611 GO:0005515
Bva02g00794 1217 Pfam Leucine rich repeat 505 562 IPR001611 GO:0005515
Bva02g00794 1217 Pfam Leucine rich repeat N-terminal domain 82 119 IPR013210 -
Bva02g00794 1217 Gene3D Ribonuclease Inhibitor 395 499 IPR032675 -
Bva02g00794 1217 SUPERFAMILY L domain-like 665 967 - -
Bva02g00794 1217 Gene3D Ribonuclease Inhibitor 500 741 IPR032675 -
Bva02g00794 1217 Gene3D Ribonuclease Inhibitor 276 394 IPR032675 -
Bva02g00794 1217 SMART LRR_typ_2 720 742 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 424 447 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 306 329 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 228 251 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 1083 1108 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 696 719 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 1035 1059 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 400 423 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 794 818 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 448 470 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 377 399 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 551 575 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 743 766 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 527 550 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 939 963 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 672 695 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 179 202 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 648 671 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 600 623 IPR003591 -
Bva02g00794 1217 SMART LRR_typ_2 330 353 IPR003591 -
Bva02g00794 1217 Pfam Leucine Rich repeat 1083 1098 IPR001611 GO:0005515
Bva02g00794 1217 SMART LRR_sd22_2 179 212 - -
Bva02g00794 1217 SMART LRR_sd22_2 228 257 - -
Bva02g00794 1217 SMART LRR_sd22_2 575 596 - -
Bva02g00794 1217 SMART LRR_sd22_2 527 559 - -
Bva02g00794 1217 SMART LRR_sd22_2 600 629 - -
Bva02g00794 1217 SMART LRR_sd22_2 353 379 - -
Bva02g00794 1217 SMART LRR_sd22_2 306 332 - -
Bva02g00794 1217 SMART LRR_sd22_2 939 965 - -
Bva02g00794 1217 SMART LRR_sd22_2 448 470 - -
Bva02g00794 1217 SMART LRR_sd22_2 720 748 - -
Bva02g00794 1217 SMART LRR_sd22_2 672 687 - -
Bva02g00794 1217 SMART LRR_sd22_2 696 714 - -
Bva02g00794 1217 SMART LRR_sd22_2 1059 1091 - -
Bva02g00794 1217 Pfam Leucine Rich Repeat 602 621 IPR001611 GO:0005515
Bva02g00794 1217 Pfam Leucine Rich Repeat 845 866 IPR001611 GO:0005515
Bva02g00794 1217 Pfam Leucine Rich Repeat 722 742 IPR001611 GO:0005515
Bva02g00794 1217 SUPERFAMILY L domain-like 1005 1115 - -
Bva02g00794 1217 ProSiteProfiles Leucine-rich repeat profile. 722 744 IPR001611 GO:0005515
Bva02g00794 1217 PANTHER UNNAMED PRODUCT 506 970 - -
Bva02g00794 1217 PANTHER UNNAMED PRODUCT 300 789 - -
Bva02g00794 1217 PANTHER UNNAMED PRODUCT 64 491 - -
Bva02g00794 1217 PANTHER UNNAMED PRODUCT 1009 1161 - -
Bva02g00794 1217 Gene3D Ribonuclease Inhibitor 81 275 IPR032675 -
Bva02g00794 1217 PRINTS Leucine-rich repeat signature 743 756 - -
Bva02g00794 1217 PRINTS Leucine-rich repeat signature 675 688 - -
Bva02g00794 1217 SUPERFAMILY L domain-like 109 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00794 Bva-Chr2 11658521 11662174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00794 55 884 Miscellaneous Gene Families AT1G74190 29.526 2.87e-68 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00794 - - lang:109344773 993.416