Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00727 ATGGCAGATTACATTAGCGAGTTGCCCGATTCTCTGCTTTGCCacattctctcttttctcccaACCAAAACAGCGGTTCTCACAGGCATTTTGTCGAACAGGTGGAGGCTGCTCTGGACTTCACTCCCAATTCTTGACTTTGATGACGATACCCAGATCCAAAACAAGAACCAATTCCATGTGGGTTTTGCAAAATTCGTCGATTCAGTTCTCATCCAACGCGAACCACAACCCATCAAAGGATTTCATCTCAAGTGCACTTTTCCAAGCTGTAACTCAATAAAGGTTAAAGCGTGGGTGAATGAGGCAATCAACCAGAGAGTAGAGCAACTAGAGCTCAATGTTTCTCCTCCGATGCGTATTGCGCTGCCCCTCACCATTTACACTTGCAGAACCCTTGTGGTTCTGAAATTGAATGGTGTCTTTGAAATTGCTTCTTTACCAGTGCATTTGCCGAAGCTCAAGGTTCTGGATATTGGCGAAGATTTTTACGCCAAGAATCATGATTTTATCATGAAATTTCTTAGTGGGTGTCCAGTTCTTGAAAATTTGGTCCTGGATTCTTTCAAAAGTTTGACCTGTGGATGCCAGTCTGGTCGGGACGACGACGTCGTTTTTGGTATCAGTTGTAGCAATTTGGTGGAAGCAAAGCTTGGCTTTTTCTACAGCAAGAGATGCACCGCTGCGGTTTATACTCTCTTCAAGACACTGAATAATGTTAGATTCCTCTCAATATCTGGCTTCACTTGTCAGTCCTTAAAGTATGCTTCTGCCAAAGATTTTCCTGCATTCCACAATTTAATCCAACTGGAAATCACATTTGGAACCTATTATTGGGAATTCTTGGCAAATTTGATCCAAAACTCCTCAAAGCTTGAAGTTCTCAACATTTACAAGGAACCATTTGCCTGTAGCAATGAGCCAGAGCCAACTTGGTTGAATCCACTTCCTATTGCTAAATGTGTATTGTCTCACCTGAAATCACTAAGCTTTGGAGGGTATCAAGGCCTTGAATGTGAGCTTGGATTTGTAGGATATATTCTGAAGAATGCTCAAGTGTTAGGCAACATGACAATCTATTGTGCCAGTCCCTTAGAGGCAATGCCAAAGCaccaaattatgaaaattttatcaacagTCCCCAGAAAATCTGCAACAtgtcaagttttattttattg 1178 0.4024 MADYISELPDSLLCHILSFLPTKTAVLTGILSNRWRLLWTSLPILDFDDDTQIQNKNQFHVGFAKFVDSVLIQREPQPIKGFHLKCTFPSCNSIKVKAWVNEAINQRVEQLELNVSPPMRIALPLTIYTCRTLVVLKLNGVFEIASLPVHLPKLKVLDIGEDFYAKNHDFIMKFLSGCPVLENLVLDSFKSLTCGCQSGRDDDVVFGISCSNLVEAKLGFFYSKRCTAAVYTLFKTLNNVRFLSISGFTCQSLKYASAKDFPAFHNLIQLEITFGTYYWEFLANLIQNSSKLEVLNIYKEPFACSNEPEPTWLNPLPIAKCVLSHLKSLSFGGYQGLECELGFVGYILKNAQVLGNMTIYCASPLEAMPKHQIMKILSTVPRKSATCQVLFY 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00727 392 SMART 9598neu4hmm 320 392 IPR006566 -
Bva02g00727 392 Pfam F-box domain 5 42 IPR001810 GO:0005515
Bva02g00727 392 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 211 391 - -
Bva02g00727 392 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 3 190 - -
Bva02g00727 392 SUPERFAMILY F-box domain 3 45 IPR036047 GO:0005515
Bva02g00727 392 SUPERFAMILY RNI-like 89 305 - -
Bva02g00727 392 Gene3D - 1 43 - -
Bva02g00727 392 Gene3D Ribonuclease Inhibitor 81 376 IPR032675 -
Bva02g00727 392 Pfam FBD 320 359 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00727 Bva-Chr2 10762699 10768110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00727 2 186 EF-hand Containing Proteins AT5G41840 36.453 1.04e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00727 - - aip:107639379 336.265