Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00443 ATGAAGAAGCAAAAATCCCCAGAAAATCTTAACCCATTTGATGTTCTCTCTGAGGAGCTGATTTTCACCATCCTCGACTTCATTGAAGAAAACCCACTTGACAAAAAGTCATTTTCCTTAGTCTGTAAGTCCTTCTATGCAATCGAAAGCAAACACCGCCGAACCCTGAAGCCCCTTCGCTCTGAGCACTTTCCTTGTGTCTTCAATCGGTACCCGTTTGTTTCCCATCTCGATCTTTCTCTTTGCCCACGAGTTTCTGATAATTCCCTTAACTTCATAGCTAATTCTTACAAAGACACGCTTCGCCGAATCGATCTTTCGCGGTCCAAGTTCTTCTCTGGTAATGGGTTGATGAGTTTGGCTTTCAATTGCAAGAATTTGGTGGAGTTGGACTTGTCTAACTCAACGGAGCTGAAAGATGGGGCGGCAGCTGCGGTGGCTCAGGCAAAGAATTTGGAGATGTTATGGCTGTCAAGGTGTAAGCAAATTACGGATATGGGAATTGGGTGTATTGCAGTAGGGTGCAAGAAGTTGAGGATGATTAATTTGAAGTGGTGTGTTGGCGTAGGGGATTTAGGGGTGGAATTGATTGCTATCAAGTGCAAGGAAATTCGAAGTCTGGATCTTTCTTACTTGCCTATTACAGATAAATGTCTGTCGTCAGTCTTTAAATTGCAATATCTTGAAGATTTGGTTCTTGAAGGATGCTACGGCATCGATGATGACAACCTTGATGTCTTCAAACATGGGTGCAAGACATTAAAGAAACTTGATATCTCAGGTTGTCAAAACATAAGTCACATTGGTCTCTGTGCACTGACAAACAGTTCTAGATGTCTAGAACAACTCTCTTTGGCAGATGGTTCTCCTGTCACTTCTGCGCTTGCTGATGGTTTGAATAAACTTTGCATGAtgcaatcaattaaattagatgGCTGCCTAGTTACTTCAAGTGGATTAAAGGCCCTTGGGAATTCGTGTATGTCACTAAGAGAGCTGAGTTTAAGCAAGTGTTTGGGAGTGTCAGATGAAGCTCTATCGTTTCTTTTGTCAAAACACAAAGATTTAAGGAAGCTTGACATCACATGCTGCCGTAAGATAACTGATATTTCTATATCCAGCATTGCAAATTCTTGCACTAGTCTCACTTCTCTCAGGATGGAATCATGTACCCTAGTTCCAAGAGAAGCATTTATCTTGATTGGACAGCAATGCCATTATCTTGAGGAGCTTGACGTAACAGATAATGAAATTGATGATGAAGGTCTTAAGTCCATTTCTCAGTGTTCCAGGCTCTCCAGTCTAAAACTAGGAATCTGTCTTAACATAACTGACAGGGGACTTGCTTTTATTGGCATGGGCTGCTCAAAGCTAAAGGAGCTGGATCTCTACAGGTCTGCAGGAATCACAGACTCAGGCATTGCAGCAATTGCTTGTGGTTGCCCTGGCCTTGAGATGATTAATTTAGCTTATTGCACTGGAATAACAGATGGTTCCTTAATCTTATTGTCCAAATGCTCAATCTTGGAAACACTTGAAATTCGTGGATGTATTCTTGTTACATCTATAGGTTTAGCATCTATTGCAGTGAAATGCAAGCAACTAAGCCGTCTAGATGTAAAGAAGTGTTACAACATTGATGATAGCGGGATACTTTCATTAGCTCATTTTTCCCAAAATCTCAGACAGATAAATCTGTCATATACCTCAGTTACAGACGTGGGCCTACTGTCACTTGCTAGCATCAGTTCCCTACAGACCTTTTCTGTTCTACACTTGCAGGGCTTGACTCCAAGAGGGCTGGCTGCTACCTTGCTATCATGTTGGGGGCTAAGAAAAGTGAAGCTCCATCTAGCATTAAAATCTTTCTTGCCTGTGCCTCTTATCAAACATGTAGAAGCACGAGGATGTGCGTTTGAATGGAGGGACAAAGTGTTTCAGGCAGAATTGGACCCCAAGTGCTGGAAATTACAGTTGGAAGATCTGATGCCGTA 1994 0.4178 MKKQKSPENLNPFDVLSEELIFTILDFIEENPLDKKSFSLVCKSFYAIESKHRRTLKPLRSEHFPCVFNRYPFVSHLDLSLCPRVSDNSLNFIANSYKDTLRRIDLSRSKFFSGNGLMSLAFNCKNLVELDLSNSTELKDGAAAAVAQAKNLEMLWLSRCKQITDMGIGCIAVGCKKLRMINLKWCVGVGDLGVELIAIKCKEIRSLDLSYLPITDKCLSSVFKLQYLEDLVLEGCYGIDDDNLDVFKHGCKTLKKLDISGCQNISHIGLCALTNSSRCLEQLSLADGSPVTSALADGLNKLCMMQSIKLDGCLVTSSGLKALGNSCMSLRELSLSKCLGVSDEALSFLLSKHKDLRKLDITCCRKITDISISSIANSCTSLTSLRMESCTLVPREAFILIGQQCHYLEELDVTDNEIDDEGLKSISQCSRLSSLKLGICLNITDRGLAFIGMGCSKLKELDLYRSAGITDSGIAAIACGCPGLEMINLAYCTGITDGSLILLSKCSILETLEIRGCILVTSIGLASIAVKCKQLSRLDVKKCYNIDDSGILSLAHFSQNLRQINLSYTSVTDVGLLSLASISSLQTFSVLHLQGLTPRGLAATLLSCWGLRKVKLHLALKSFLPVPLIKHVEARGCAFEWRDKVFQAELDPKCWKLQLEDLMP 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00443 664 SUPERFAMILY F-box domain 5 69 IPR036047 GO:0005515
Bva02g00443 664 Gene3D Ribonuclease Inhibitor 289 394 IPR032675 -
Bva02g00443 664 PANTHER UNCHARACTERIZED 1 607 - -
Bva02g00443 664 SUPERFAMILY RNI-like 294 600 - -
Bva02g00443 664 Gene3D Ribonuclease Inhibitor 8 197 IPR032675 -
Bva02g00443 664 Gene3D Ribonuclease Inhibitor 198 288 IPR032675 -
Bva02g00443 664 SUPERFAMILY RNI-like 61 286 - -
Bva02g00443 664 Pfam Leucine Rich repeat 355 376 IPR001611 GO:0005515
Bva02g00443 664 Pfam Leucine Rich repeat 455 478 IPR001611 GO:0005515
Bva02g00443 664 Pfam Leucine Rich repeat 404 427 IPR001611 GO:0005515
Bva02g00443 664 Pfam Leucine Rich repeat 558 580 IPR001611 GO:0005515
Bva02g00443 664 Pfam Leucine Rich repeat 251 269 IPR001611 GO:0005515
Bva02g00443 664 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 1 607 - -
Bva02g00443 664 Gene3D Ribonuclease Inhibitor 395 625 IPR032675 -
Bva02g00443 664 SMART LRR_CC_2 481 506 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 98 123 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 124 149 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 327 352 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 379 404 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 71 96 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 455 480 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 558 582 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 150 174 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 175 200 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 532 557 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 430 454 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 509 531 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 251 276 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 405 429 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 201 225 IPR006553 -
Bva02g00443 664 SMART LRR_CC_2 353 378 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00443 Bva-Chr2 5956579 5961635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00443 K10268 - gmx:100803617 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00443 02 5956579 5961635 Bva02g00443 02 5956579 5961635 ECH