Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00441 ATGTCAGCTTCCGACGACACAGAGCCTAAGAATCATGCTCGGTCTCCTACACCGCCGCCAATGGAGGAAGAAAGCCAAACGCCGAAGAAGGCAGAAGACGGTGCAGCGGGGGTCATGCGGCAGCTCAAGAGTAACGATTTGTTTAAGAAAGGCTCATTGGTGTTGAGAGGATTGGCTCTGCTTTTCTCTTTGATCTCTGTCATCATCATGGCCTCCAACAAGCATGGCGATTGGAAGGATTTCCGCAGATTCGAAGAATACAACTATGTGTTGGCTATAGCGATCCTGTCTTCGCTGTACACAGGAGCTCAAGTGCTTCGTCAAATTCAAGAACATGCAACAGGAAAATACATGATTCTGCGGAGAACGGCATCGTGGATTGACTTCTCTGGAGATCAGATCATGGCGTATCTCTTGGTGTCATCAGCATCTTCTGCAGTTCCACTAACAGATAGATTAAGAGAAgctaaagatttattttcagaCTCTTCATCTGCATCCATTAGCATGTCCTTTTTGGCCTTCTTCTGTCTAGCAGGTTCAGCCATGATTTCAGGCTACAAGCTATCAACTCAACCTTATCTCTA 587 0.4532 MSASDDTEPKNHARSPTPPPMEEESQTPKKAEDGAAGVMRQLKSNDLFKKGSLVLRGLALLFSLISVIIMASNKHGDWKDFRRFEEYNYVLAIAILSSLYTGAQVLRQIQEHATGKYMILRRTASWIDFSGDQIMAYLLVSSASSAVPLTDRLREAKDLFSDSSSASISMSFLAFFCLAGSAMISGYKLSTQPYL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00441 195 Pfam Casparian strip membrane protein domain 48 177 IPR006702 -
Bva02g00441 195 PANTHER CASP-LIKE PROTEIN 4B1 21 194 - -
Bva02g00441 195 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 21 194 - -
Bva02g00441 195 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00441 Bva-Chr2 5949386 5951321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00441 - - pvu:PHAVU_008G090400g 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00137 01 1040882 1042313 Bva02g00441 02 5949386 5951321 BWGD
Bva02g00441 02 5949386 5951321 Bva02g00441 02 5949386 5951321 ECH