Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00440 ATGGAGCCTATCACAGGCAAGCCAGCCTTTCTCCGGAACATTCTAGGAAGGTTGCTCGTATTCGGCGTTTTCGTCATCGTCGTTCGGTTCGCTTACGTCGTGACTATCGCCGGCGAGTCTTGCAATGTTGGCGACTTCTGTTTCTTCTCCCTGCCGGAAAGTTTGAACCTTATCACTGCCAGCGCCGGAACCGGAGCTTTAGCAGTTGCTTCCAATAACGTTATCCGATCAACAGCTGCCGGGACGTGGCAGCCGGAGCTATATACCAGCAAAGATTGGATCAAGGCTGTTAATTTCTACTCCTCCGTGTTCCAAGATCTGATTTCGGATGGTTACCTTTCGCCAGAGGCCAAAGCATTGTGTGTAGAGACGCCGACAGGACACGATGTCTTCGCCTTGAAAGAGATCGGCGTTTCTGACTCCATTGGGATTTCGAAGAAAGCTTCAAAGCCTTTGGTGAAAGCCGGCCAGGCGCAGAAACGGATACCCTTTGAGGATAACACCTTTGACTTCATCTTTTCCGGCGAGGGTGGGCTCGAGAAGGCGTTGCGACCTTCAGATTTTGCTTCTGAGATTGCTCGGACGCTGAAACCCGAAGGGTTTGTGGTGTTCCATATAAAGGCTAAAGATACGTACAGTTTCAATTCATtccttgatttatttaattgttgcaGACTAGCGAAATCACATAATATAGATGGTTTTGATTCTTCAATGCCTTATATACGCGAAATTGTTCTGAGAAAAGAAGGTGATGGCATTGGTCATGAAGTCGAAAAAATTGATGGTGATTTCAATGGCAAGTGTTCTGTTCCTGGGTATAAACAAGATATAGTTAGAAATGCTGAGCGTCTGATTGAAGAAGAACCGTTGAAGCCATGGATTACTTTGAAGAGGAATGTAAAGAATATTAAGTACCTTCCATCAAGAGTGGATATAGGCTTTAAGAATAGGTATGTGTATGTGGATGTTGGAGCTAGAAGCTATGGTTCTAGTATTGGAAGTTGGTTCAGAAAACAGTACCCAAAGCAAAATAAGACCTTTCATGTGTATGCAATTGAGGCCGACAAGACTTTCCACCAAGAGTATGGGCTGAAGAAAGGAATCACCTTGCTACCTTATGCAGCTTGGGTTAGGAATGAGACCTTAACATTTGAGATTCATCGTGATCCGGGTGAGCAAGTTAAAGTTAAAGGAAGAGGAATGGGCAGGATTCAACCTTTGCAGCAGTCTTCAGGTGTTTTTGATGGGGAAGTAGAGAAGATACAGGGATTTGATTTTGCACACTGGTTGAAGAACACAGTTACAAAGAAAGATTTCGTTGTAATGAAAATGGATGTGGAAGGTGGCAAAGATGTTGCCCAGGGCAGAGGAGTCCAAAGTATGAGAAAACGTATGACCAATGCTTGGAGCTCTTCCATTCTCTCAGACAAAGTGGAGTTCTTGTTCATCAATGGTGGTAATTGCCTGATAGAAAGAAGAGAATTCTGTACTGTAATAGCATGTGGTGTCTTGTATTCAATAAACTA 1529 0.4356 MEPITGKPAFLRNILGRLLVFGVFVIVVRFAYVVTIAGESCNVGDFCFFSLPESLNLITASAGTGALAVASNNVIRSTAAGTWQPELYTSKDWIKAVNFYSSVFQDLISDGYLSPEAKALCVETPTGHDVFALKEIGVSDSIGISKKASKPLVKAGQAQKRIPFEDNTFDFIFSGEGGLEKALRPSDFASEIARTLKPEGFVVFHIKAKDTYSFNSFLDLFNCCRLAKSHNIDGFDSSMPYIREIVLRKEGDGIGHEVEKIDGDFNGKCSVPGYKQDIVRNAERLIEEEPLKPWITLKRNVKNIKYLPSRVDIGFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYGLKKGITLLPYAAWVRNETLTFEIHRDPGEQVKVKGRGMGRIQPLQQSSGVFDGEVEKIQGFDFAHWLKNTVTKKDFVVMKMDVEGGKDVAQGRGVQSMRKRMTNAWSSSILSDKVEFLFINGGNCLIERREFCTVIACGVLYSIN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00440 509 Gene3D Vaccinia Virus protein VP39 302 452 IPR029063 -
Bva02g00440 509 Pfam Methyltransferase domain 154 204 IPR013216 GO:0008168
Bva02g00440 509 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 309 449 IPR029063 -
Bva02g00440 509 PANTHER METHYLTRANSFERASE 1 450 - -
Bva02g00440 509 PANTHER METHYLTRANSFERASE 1 450 - -
Bva02g00440 509 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 156 215 IPR029063 -
Bva02g00440 509 Gene3D Vaccinia Virus protein VP39 138 251 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00440 Bva-Chr2 5941297 5943610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00440 - - jcu:105648080 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00136 01 1034125 1036672 Bva02g00440 02 5941297 5943610 BWGD
Bva02g00440 02 5941297 5943610 Bva02g00440 02 5941297 5943610 ECH