Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00428 ATGAAGCCAAAATGCGCCAGCTGTAATAGTGCATTGTTTGTTAAAGCTTTTACTTGGCCATTTGGCGCTTTTGTTTTCTCGGCGAGCCTTTCTGCCTCACTCACCGACCACACTGTGGCAATGGAAAATGCAAAGATGGGAGCAGGGAGGAAATCACAAACATTTAATGTCAATGGGACTGTACCCTTCTTTCCCACAACCTACTTTTCTGTATGTGGCAGAAATTTGCAGAAGAATCAACTTGGTGGTGTCATATTTGGTTGCAAGACCAATAGTTTGAAGGAATGTCTCTCCAAACAACTCTTTGGCTTACCAGCTCAACACTTCTCTTATGTGAAGAATATAGATCCTGGATTACCTCTGTTTCTGTTCAACTATAGTGACAGGAAACTTCATGGAACTTTTGAAGCTGTGAGCAAGGGGCAAATAAATATAGACCCTTATGGGTGGGCTGCTGATGGGGATAGAACACAGTATCCAGCACAGGTGCAAATTCGTGTCCGGTTAAAGTGCCACCCACTGTCTGAAGACAAATTTAAACCAGTCATTGCTGACAACTACTACAGTTATAACCATTTCTGGTTTGAGCTGGACCATGGACAAGCATCCAAGCTGATCTCTTTACTAGAGTCTTCATCAATTGCCCCAGGTACTTCTGCAACACAGACTACAACAAGGTGGAGAACTGTATACCGACCTCTTCAATCACAAGAATCTCCAGGGGAAGGTGAAGTGTTTAGAATGCTTGACTCAGAGATGGAGAATTCTACTCACTCCAGTAGGAAATCAGATTCCACagaaattctttcttcttttgatggaGACATCCAGCAATGGGATTCTCAAATAGATGTGAAGGAAGTGGAGCAGGAAGAAAAAGACCTTCTATTCatgaaactaaaaaaattgattcataaCCAAAGTCAAGATCTTTCTTTGTCAGGCAatgtaaaagataataatgacattaaaaatatgcatTCTGAGGATAAAGGATGTTTGGAGGCATCAAGTGGTTTAgaggagaagaaggaagagagtCCTGTTCCTTCAATTGAGTGTCAGTTTATCATAACCCAGTTGATGCAAGATGTTGAAGAACTAAAGGCTTTCAAAACAGCACAAACTCAGAAGATTGCTTATCTGGAGCAGAAGCTGGAGCTGGCAGAAATGGAAATTCAGCACCTGAAGAATCGTTGTACAATCTTGGAATCTGCATGTAATCATTCTGTGATGCATAATGAGAAGAGGGTTATCCAGTTATCTGATGACCTGCATTTAGACTCTAAAGAGTCATTGTTTTTAATAGGAGGCTTTGATGGAGAATCCCCGCTAGCATCTATGGATTTGTATTGTCCTTCCCAAAATGTGATTAAACCTCTCAAGCCTATGAGCACAGTTCGCTCATACGCATCTGTCGCACAGTTGAATggtgatatttatatatttggtgGTGGAGATGGTACTCTTTGGTATGATACAGTTGAATCATACAGTCCACTTTGCAATCAGTGGACCTTGTGTCCATCTCTTGCtcaaaagaaaggaagtttGGCCGGAGCTGCTTTGAACAGCAAAATATTTGCCATTGGTGGAGGCAATGGAATTGACTGCTTTTCAGATGTTGAAATGCTTGATTTAGATATTGGACGGTGGATCTCTACACGCTCAATGCTACAGAAGAGATTCTCTCTTGCCGCTGTGGAACTTAATGGTGTGCTTTATGCTACTGGTGGATTTGATGGGACTGACTATCTTAAGTCTGCTGAAAGATTTGACCCCAGGGaacattcttggaccaaaatagCAAGCATGAATGAAAAGCGGAGCTGCCACTCATTGGTTGTTCTAAACGAAAAATTGTATGCACTAGGTGGCTTTGATGGAGGTGAAATGGTTCCTAGTATTGAGGTGTTCGATCCTCGTCTTGGGGCGTGGATGATGGGGGAACCAATGAATCAGCCTAGAGGATattctgctgctgctgttgtcAAAGATTCTATTTACATAATTGGGGGAATTAAAGTTGATGATCAAATTGTAGATTCGGTTGAGAATTATAAGGAAGGCCAGGGATGGCAAGAAACTTTCACAACAGTGGTTGGCAGAAGGTGTTACTTGTCAGCTATTGCTATATG 2138 0.3891 MKPKCASCNSALFVKAFTWPFGAFVFSASLSASLTDHTMGAGRKSQTFNVNGTVPFFPTTYFSVCGRNLQKNQLGGVIFGCKTNSLKECLSKQLFGLPAQHFSYVKNIDPGLPLFLFNYSDRKLHGTFEAVSKGQINIDPYGWAADGDRTQYPAQVQIRVRLKCHPLSEDKFKPVIADNYYSYNHFWFELDHGQASKLISLLESSSIAPGTSATQTTTRWRTVYRPLQSQESPGEGEVFRMLDSEMENSTHSSRKSDSTEILSSFDGDIQQWDSQIDVKEVEQEEKDLLFMKLKKLIHNQSQDLSLSGNVKDNNDIKNMHSEDKGCLEASSGLEEKKEESPVPSIECQFIITQLMQDVEELKAFKTAQTQKIAYLEQKLELAEMEIQHLKNRCTILESACNHSVMHNEKRVIQLSDDLHLDSKESLFLIGGFDGESPLASMDLYCPSQNVIKPLKPMSTVRSYASVAQLNGDIYIFGGGDGTLWYDTVESYSPLCNQWTLCPSLAQKKGSLAGAALNSKIFAIGGGNGIDCFSDVEMLDLDIGRWISTRSMLQKRFSLAAVELNGVLYATGGFDGTDYLKSAERFDPREHSWTKIASMNEKRSCHSLVVLNEKLYALGGFDGGEMVPSIEVFDPRLGAWMMGEPMNQPRGYSAAAVVKDSIYIIGGIKVDDQIVDSVENYKEGQGWQETFTTVVGRRCYLSAIAI 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00428 705 Coils Coil 365 399 - -
Bva02g00428 705 Pfam Development and cell death domain 75 201 IPR013989 -
Bva02g00428 705 ProSiteProfiles DCD domain profile. 72 204 IPR013989 -
Bva02g00428 705 PANTHER - 63 704 IPR044832 GO:0034976
Bva02g00428 705 Pfam Kelch motif 513 551 IPR006652 GO:0005515
Bva02g00428 705 Pfam Kelch motif 556 599 IPR006652 GO:0005515
Bva02g00428 705 Pfam Kelch motif 461 504 IPR006652 GO:0005515
Bva02g00428 705 Pfam Kelch motif 602 646 IPR006652 GO:0005515
Bva02g00428 705 SMART kelc_smart 472 518 IPR006652 GO:0005515
Bva02g00428 705 SMART kelc_smart 566 612 IPR006652 GO:0005515
Bva02g00428 705 SMART kelc_smart 519 565 IPR006652 GO:0005515
Bva02g00428 705 SMART kelc_smart 613 659 IPR006652 GO:0005515
Bva02g00428 705 SMART kelc_smart 425 471 IPR006652 GO:0005515
Bva02g00428 705 Gene3D - 413 699 IPR015915 GO:0005515
Bva02g00428 705 SMART dcd 72 204 IPR013989 -
Bva02g00428 705 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 63 704 - -
Bva02g00428 705 SUPERFAMILY Kelch motif 424 703 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00428 Bva-Chr2 5881387 5888006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00428 - - pvu:PHAVU_008G092000g 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00428 02 5881387 5888006 Bva02g00428 02 5881387 5888006 ECH