Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00333 ATGGTTGGAATCATGGCCACGAATTCGCGGGAAAAACTCGCTGGTCTCATAAACTCGGCCAAGTTGGCCCCCGACATACCCTCCAAGCTCGATTATTTGCGTCAACTCAAGCTAGAATTGCCCCAAGAAGACCCTGTTTTGCTCACTGAATTCCTTCCATCACTCTTCGAGCTTCAGTCTGATCGCTTCAGCCCAGTTCGCAAATTTATCACCCAGATGATTGGTGAAATTGGATCTAAAAATACAGAGTTTTTGACTGACATTGTGCCTGTGCTGGTAACTGTTTTGGATGATGATACACCAGCTGTTGTTCGACAAGCTATAACATGTGGAATTGATTTATTTCGTTCCACTCTTGAGAAAATTGCAATTCAGGGTCTATACTCTAGTGAGTTGGACAGTGCACTCGAATCTGCTTGGGCATGGATGGTGAAGTTCAAAGACAAAGTATATTCAATAGCTTTTGATCCTGGAACTGGTGGTACAAAGTTGCTGGCACTGAAGTTTGTTGGAATAGTGATACTTCTTTACACACCTGATCCCAAATGTTCCGCTGAGCCCCCTCCCAGTCCTCATCGAGGAAGGCTTGTGGGATTTAATATATCATGGCTTAGGCGGGGTCATCCTGTACTTAATGTTGGAGATTTGTCAAtagaagctagtcaaaatttGGGTCTCTTGCTTGATCAACTCAGGATTCCGGCAGTGAAGTCTCTTAGTAACTCAGTGGTCATTGTGCTAATTAACAGCCTTTCCACCATTGCAACAGAAAGGCCTGCATTTTATGGCCGTATCTTGCCAGTATTGCTCAGTTTGGAACCATCAAGCTCTGTTGTCAATGGGGTCTGTGTAACAGCTGCACATCATGCCTTGAAGAAGGCCTTTCTCACCTGCTTGAAATGTACACATCCAAGTGCTGCTCCgTGGCGAGATCGTCTGGCAGATGCATTGAAGGAAATGCAGTCTGAAGGAAAGGCTGACCAGGTTTTCCACCCAGTTTCCAAGAGTAACGGATGTTTAATGGGAGAGAAAGATGATTTTCCAGTTATTAAGGAAGAAAATCCTGCAATCAATTCATGTGATTCTGTGCACAGTAATTTGGAGAGGAAGCGATCAGGATCACAGGATGGAGGTGATTTAAATGATGTAGATGTTCCTGGAAAACGTGTCAGAACAACATTCAGTGTCCCAGAAGAACCTAAGAAAGAGTTAGATGGGGGTATCACTGTTTCTTGGGAGGACACTGCAACTAAAACAACCTCGCAAGGAAACGTTGATAATGGGCCTGTCCAGCAGCTTGTTGCCTTATTTGGTGCGTTGGTTGCTCAAGGTGAAAAGGCTGTTTTGTCATTAGAGATTCTTATCTCGAGCATTTCTGCTGACTTGTTAGCTGAGGTGGTCATGGCTAATATGTGTAACCTACCCCCAAATTATCCCAATGCTGAAGGTGATGATGAGCAACTGCATGACATTAGTATAATTGGTGCTGATGACAAGGCTAAATATCCGCCATCATTTGTAGCTGGTGTTATGTCACTTTCTAGTACTTTCCCACCAATAGCATCACTTCTTGATCCACATCAACCAGTGTCTGATGAGAAGTCTGTAGGGGAGGAAGAAAATTCTGTAACTGGAGCAGATAGTGCCATGGTGCATTCTGGCATTAATTATTCATCTGAAAATGTAACGGTATCTGCTGATTTTCCATCTCATGATGCCAATATACCTGGAATGGATAATGGCTGCTCAACTGTGCCTTTAGACATCCATGATGTGGGCAACCTGGAGAGTGGAATTCCTGGCCTGGATTCTTTTGCCCGTAGTGATGTTGTAACAGAAACCTTAGCTGCTTCCTCATTGGTTTCCACTGATATAGAAGATGCCAGTCAAGAGCAAGTTTCAAGTTTGGCTGAACAATCACCTCAGAACTTAGTTCCATCAATATCAACAGAGAGATCTGAGGAGCTTAGCCCGAAAGCAACTGTTACAGAAGTCAATAGCTTGGTCTCCTCAACAGCAACTTCAATAGGGTTGTCTTCTCGTTTGGTTCTGCCAAAGATAACTGCACCTGTTGTTGACCTTGAAGATGAACAGAAGGATCATCTACAAAAGTCAGCCTTTATGCGTATCATTGAGGCATATAAGCAAATAGGAGTAGCTGGAGGCTCAAAAGTCCGATTCTCAATACTTGCTTATTTAGGGGTTGAGTTTCCCCTGGAATTAGACCCATGGAAACTGTTACAGAAGCATATCTTGGCCGATTACACAAGTCATGAGGGACACGAGTTGACATTACGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACTGCTGCTTCTGTATATGAAACATTCCTCTTGACAGCGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCGGATAAATCATTAAGTAGGTTGCTTAGTGAAGCTCCTTATTTGCCAAAGTCAGTCTTAAGGATTTTGGATAACATGTGTTCTCCTTTAAGTTTGGATAAAGCTGAAAAGGAGTCCCAAAGTGGGGACAGAGTGACTCAGGGTCTTAGTGCTGTGTGGAGTCTGATTTTGCTTAAGCCTCCAATTCGAGATGCCTGCTTGAAAATTGCTTTACAGAGTGCCGTGCATCATATGGAGGAAGTACGAATGAAGGCAATACGTCTGGTTGCAAACAAGCTTTATCCTTTAGCATCCATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAACGCTTCTTTCAGTGATAAGTACTGATACATCTGAAGCTACTGATGCCGAAGGATCTATTGCTGATTCACAGAAGGGACCTGATATTGAAAAACCTTCAAATGAACCATCATCAATGAGTGGCAGCAGTAAGGATATCTCCTCCGATACTCGTCAGTCATGCACATCTGAAAATGTCTTGGAGGTTTCAGTCTTAGAGGCTCAGAGGTGCACGTCATTGTATTTTGCTCTATGTACAAAGAAACACTCCCTGTTTCGCCAAATATTTGACATCTATATAAGCACATCAAAGGCAGTGAAGCAGGTGGTTCATCGTCATATCCCTATATTAGTACGTACTATGGGCCCGTCTTCAGATCTTCTTGAAATTATTTCTGATCCTCCAAATGGAAGCAAGAACCTCCTAATGCAGGTTTTACATACACTTACTGATGGGACAGTCCCTTCTAAGGATCTGATATTTGCAGTTAAAAGGTTATATGATTCAAAACTAAAGGAAGCAGAAGTTCTCATTCCTATATTACCCTTCCTAGCGAAAGATGAGgtTATGCCAATTTTCCATGGCATTGTGAATCTTCCTCTGGATAAGTTCCAAGCAGCACTTGCTCGTCTATTACAGGGATCATCCCATTCTGCCCCAGTGCTGACACCTGCTGAAGTATTAATTGCTATTCATGGAATAGATCCTGAAAAGGATGGAATTCCCTTAAAGAAGGTCACAGATGCATGCAATGCTTGCTTTGAGCAGCGGCAGATTTTCACTCAACAAGTTCTAGCTAAGGTTTTGAATCAACTGGTTGAGcaaatccctcttcctttACTGTTCATGCGCACAGTATTACAAGCAATTGGTGCTTTTCCAACATTGGTGGACTTTATAATGGAGATTCTCCATCGCCTTGTGGGCAAGCagATATGGAAATACCCAAAGTTGTGGGTAGGGTTCTTGAAATGTGTGCAATTGACAAAACCTCAATCATTTCCTGTTATTCTTCAGCTACCTACGGCACAACTGGAAAATGCATTAAACAAAATTGCAGCACTGAAGGCACCATTGATTGATTATTGTAGCCAGCCACATATCCAACCTACGCTTGCCAGGTCTCAGTTGGTTGTTCTAGGACTTGCATCAGATTCTCAGGTTTCAAATCAAGCACAAACTCGTCAAACACAGACTGGTGAGACAGGCAACTCAGACAAGGATACAGGGACAGAAAAATCTAAAGAGTCATCATCTACAGCAAGCTG 3998 0.4255 MVGIMATNSREKLAGLINSAKLAPDIPSKLDYLRQLKLELPQEDPVLLTEFLPSLFELQSDRFSPVRKFITQMIGEIGSKNTEFLTDIVPVLVTVLDDDTPAVVRQAITCGIDLFRSTLEKIAIQGLYSSELDSALESAWAWMVKFKDKVYSIAFDPGTGGTKLLALKFVGIVILLYTPDPKCSAEPPPSPHRGRLVGFNISWLRRGHPVLNVGDLSIEASQNLGLLLDQLRIPAVKSLSNSVVIVLINSLSTIATERPAFYGRILPVLLSLEPSSSVVNGVCVTAAHHALKKAFLTCLKCTHPSAAPWRDRLADALKEMQSEGKADQVFHPVSKSNGCLMGEKDDFPVIKEENPAINSCDSVHSNLERKRSGSQDGGDLNDVDVPGKRVRTTFSVPEEPKKELDGGITVSWEDTATKTTSQGNVDNGPVQQLVALFGALVAQGEKAVLSLEILISSISADLLAEVVMANMCNLPPNYPNAEGDDEQLHDISIIGADDKAKYPPSFVAGVMSLSSTFPPIASLLDPHQPVSDEKSVGEEENSVTGADSAMVHSGINYSSENVTVSADFPSHDANIPGMDNGCSTVPLDIHDVGNLESGIPGLDSFARSDVVTETLAASSLVSTDIEDASQEQVSSLAEQSPQNLVPSISTERSEELSPKATVTEVNSLVSSTATSIGLSSRLVLPKITAPVVDLEDEQKDHLQKSAFMRIIEAYKQIGVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILADYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYETFLLTAAEALRDSFPPSDKSLSRLLSEAPYLPKSVLRILDNMCSPLSLDKAEKESQSGDRVTQGLSAVWSLILLKPPIRDACLKIALQSAVHHMEEVRMKAIRLVANKLYPLASISQQIEDFAKETLLSVISTDTSEATDAEGSIADSQKGPDIEKPSNEPSSMSGSSKDISSDTRQSCTSENVLEVSVLEAQRCTSLYFALCTKKHSLFRQIFDIYISTSKAVKQVVHRHIPILVRTMGPSSDLLEIISDPPNGSKNLLMQVLHTLTDGTVPSKDLIFAVKRLYDSKLKEAEVLIPILPFLAKDEVMPIFHGIVNLPLDKFQAALARLLQGSSHSAPVLTPAEVLIAIHGIDPEKDGIPLKKVTDACNACFEQRQIFTQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMEILHRLVGKQIWKYPKLWVGFLKCVQLTKPQSFPVILQLPTAQLENALNKIAALKAPLIDYCSQPHIQPTLARSQLVVLGLASDSQVSNQAQTRQTQTGETGNSDKDTGTEKSKESSSTAS 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00333 1332 SUPERFAMILY ARM repeat 45 318 IPR016024 -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 631 659 - -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 364 386 - -
Bva02g00333 1332 Gene3D - 3 336 IPR011989 -
Bva02g00333 1332 PANTHER SYMPLEKIN/PTA1-RELATED 1 1234 - -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 1297 1315 - -
Bva02g00333 1332 Pfam Symplekin tight junction protein C terminal 1085 1261 IPR022075 -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 930 967 - -
Bva02g00333 1332 Pfam Symplekin/PTA1 N-terminal 101 321 IPR032460 -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 1297 1332 - -
Bva02g00333 1332 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1234 - -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 360 386 - -
Bva02g00333 1332 MobiDBLite consensus disorder prediction 947 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00333 Bva-Chr2 5017602 5033123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00333 K06100 - gmx:100779360 1920.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00333 02 5017602 5033123 Bva02g00333 02 5017602 5033123 ECH