LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g00270	ATGTCATCCTTCGATCGGCCCTTCGACGACGACAGCTTTTCTGGCTACGATTCCGGCCTCCAATCACAGCGATTCGACTCGTTCTCAAACTTCGACGCTGACTCGGTTAAGGACTCGGCCGGTGACTCGTCTCCGATATTCGCCACCCAGTCCTACTCCGCCGGAGACGACGTGTTTTCAACTCAGTCGGTGGCGGAAACCCCGTCTCCACCGTCGATCTATTCCACCGGCCCGGGATACACTGCGTTCTCACCGGAGCAGAACGGGCAGGGCCTCGATACTGGTTTTGGCACCTCAGATGGTCCGATCCTTCCACCTCCGGCGGATTTGGAACCGGAGGAGGGTTTTGCTCTGAGGGAATGGCGAAGAGTGAACGCAATTCAATTAGAAGAGAAGGAGAGGAAGGAGAAAGAGTTGCGCCAACAGATTATAGAGGAGGCTGACCAGTACAAGGTTGAATTTTATAGGAAGCGCGAGGTTACTGTTGAGAACAACAAAGCTACTAACAGGGAAAGAGAGAAGCTTTTTCTGGGGAATCAGGAGAAGTTTCATGCTGAAGCTGATAAACATTACTGGAAGGCGATTGGTGAACTTATTCCCCGCGAAGTGCCAGCCATagaaaaaagagggaaaaaggaTAAAGACAAGAAGCCTTCAGTTGTTGTAATCCAAGGGCCAAAGCCAGGGAAACCAACTGACCTTTCAAGAATGCGCCAAATACTGTTGAAGCTTAAGCATAATCCTCCTCCTCATATGAAGACCAAGCCACCAGAACCTAAAAAGGATGCTAAAACTGGACCTCCTGATGGAGCTAATACCAGCACTACCACTCCCAAACCTGTAGTGCCACAGCCCAACGCTGTTGCCGTAGCTTG	875	0.4994	MSSFDRPFDDDSFSGYDSGLQSQRFDSFSNFDADSVKDSAGDSSPIFATQSYSAGDDVFSTQSVAETPSPPSIYSTGPGYTAFSPEQNGQGLDTGFGTSDGPILPPPADLEPEEGFALREWRRVNAIQLEEKERKEKELRQQIIEEADQYKVEFYRKREVTVENNKATNREREKLFLGNQEKFHAEADKHYWKAIGELIPREVPAIEKRGKKDKDKKPSVVVIQGPKPGKPTDLSRMRQILLKLKHNPPPHMKTKPPEPKKDAKTGPPDGANTSTTTPKPVVPQPNAVAVA	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	202	220	-	-
	Bva02g00270	291	PANTHER	CLATHRIN LIGHT CHAIN 3	1	283	-	-
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	59	95	-	-
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	59	111	-	-
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	31	50	-	-
	Bva02g00270	291	Pfam	Clathrin light chain	111	216	IPR000996	GO:0005198\|GO:0006886\|GO:0016192\|GO:0030130\|GO:0030132
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	202	291	-	-
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	268	282	-	-
	Bva02g00270	291	PANTHER	CLATHRIN LIGHT CHAIN	1	283	IPR000996	GO:0005198\|GO:0006886\|GO:0016192\|GO:0030130\|GO:0030132
	Bva02g00270	291	Coils	Coil	118	149	-	-
	Bva02g00270	291	MobiDBLite	consensus disorder prediction	251	265	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g00270	Bva-Chr2	4217580	4220123	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g00270	-		-	aprc:113850159	414.846

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva02g00270	02	4217580	4220123	Bva02g00270	02	4217580	4220123	ECH