Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00267 ATGAAAACCCTCACCAGCACTTGCTCAAAGACCATCTTTGAGAGGTTGTCTGACACTAGGAGAGGTGTCATTAATGTTGCTAACAGGCCCAAAATTTGCTTGTCCTTTGGGTCCCGGGAGGATAATGTCTCCAACTTTGGGTTCCTGCAACTGGTTTCAACACAACAGAAGGGTTTCCTTCCTGTTCATGCTCTATCATCTGAAACCCAgGCTGACTTGAGCGCTGTAGAAGATCCTCAAGTTGAAACTCCACAAACAACAAAGTTAGTTCATGTGAAGTTTCAGCTGCAGAGACAGTGTAAGTTTGGTGAACAGTTTCATATAGTAGGGGATGATCCTGCATTTGGTTTGTGGAACCCTTCAGAAGCATTGCCCATGACCTGGTCGGATGGGCATATGTGGACTGTTGAACTGTACATACCTGCGGGAAAGTCAATCCAGTTCAAGTTCCTACTAAAAGAAGCAACAGGGAACATCATATGGCAGCCAGGTTCAGATAGAGTTATCCACACTTGGGAAAGCATGACCAGTGTAACTGTTTGTGAAGATTGGGAGAATGCTGATCTTCAGAAAGTAATAGAGGAAGAACCATTTGCTCTTTCAGATGAGGAAATCCACTCAGAAATGTCCATTGTTGCTGAAAATTTGGCTGAGCCTAAAGAGAAACTGGTTTCTAGTGTAGACACTGAATCAGGCATCGAAGATAGCAAAACTCATACTGAGCAGAAACTACATACTGAACCAGGCATGCAACAAGTCATTGGTTATGACATTCCTTCCTCAACAAAGGAGCCTTTGGCTATTGTTGCAGAAAATATAAGTCCCTCAAATGATGTCAGCATGAATACAAGAGATGGAACACATCTTGGAAACAATGATGAAGCTGCAGCAGTCAAGGAACAGAATGGTGCAGTTCTGCAGGGCAACTTATTCGAACATGAAGGAGGTCCCGTTCTAGTACCTGGCTTGACATCATCTGCTGTGCCAAGCGGAGAAACAGCTCCGGAGAAAGATGATGAAATGACCATCAAGGACACTTCAGTTGGAGCTTTTGAAACTATGGACCAGAACCTGCCAGAGTTCAATCAGAAGCACGATTCTGATGAAGGCACACCTCAAGAAATAAATGCAGAACTCAATGATGAGCAAGAGTTGCTTCACACTGAATTCAAAGAGGAGTCCTATTTAACCACAATGGAAGATGAGTTATCAGACTCGTCTCATTTGTTCAAAATAGAAGAGATGTCTGACTTGTCGGATTCGGCCACCATGGAAGAGATGTCAGACTCTCAGCCAGTTGACGAACTACTGGAAGGAATTTTACTCAATCTCATGAGTTCTGTGATTATTCTGCTTCACTTgcctaaatttttattggctTTGCAAGGATGGATAGgagcaaaagaaatttcttg 1415 0.4219 MKTLTSTCSKTIFERLSDTRRGVINVANRPKICLSFGSREDNVSNFGFLQLVSTQQKGFLPVHALSSETQADLSAVEDPQVETPQTTKLVHVKFQLQRQCKFGEQFHIVGDDPAFGLWNPSEALPMTWSDGHMWTVELYIPAGKSIQFKFLLKEATGNIIWQPGSDRVIHTWESMTSVTVCEDWENADLQKVIEEEPFALSDEEIHSEMSIVAENLAEPKEKLVSSVDTESGIEDSKTHTEQKLHTEPGMQQVIGYDIPSSTKEPLAIVAENISPSNDVSMNTRDGTHLGNNDEAAAVKEQNGAVLQGNLFEHEGGPVLVPGLTSSAVPSGETAPEKDDEMTIKDTSVGAFETMDQNLPEFNQKHDSDEGTPQEINAELNDEQELLHTEFKEESYLTTMEDELSDSSHLFKIEEMSDLSDSATMEEMSDSQPVDELLEGILLNLMSSVIILLHLPKFLLALQGWIGAKEIS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00267 471 SMART CBM_20_2 89 181 IPR002044 GO:2001070
Bva02g00267 471 PANTHER ALPHA-AMYLASE 1 402 - -
Bva02g00267 471 PANTHER OS01G0856900 PROTEIN 1 402 - -
Bva02g00267 471 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 84 186 IPR002044 GO:2001070
Bva02g00267 471 CDD CBM20 92 184 - -
Bva02g00267 471 SUPERFAMILY Starch-binding domain-like 86 183 IPR013784 GO:0030246
Bva02g00267 471 Gene3D Immunoglobulins 87 185 IPR013783 -
Bva02g00267 471 Pfam Starch binding domain 90 179 IPR002044 GO:2001070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00267 - - aprc:113849429 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00267 02 4191021 4194160 Bva02g00267 02 4191021 4194160 ECH