Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00253 ATGTTGCCTCAGAAGCAGGCAGAGGAAGCAATTGTCACCAACTTCACTGAGACAGAGCATGAAGGTGcaagagaagaggaaaaggagCAAGACCACTCCATTTTCAGCCTCAAGAGTGTTCTTTGGCATGGTGGTTCTGTTTGGGATGCTTGGTTCAGCTGTGCTTCAAATCAAGTAGCACAAGTGCTGCTTACACTGCCATATTCTTTCTCTCAACTGGGTATGCTTTCTGGGCTCTTGTTTCAAGTTTTCTATGGGCTTATCGGAAGCTGGACAGCTTATCTAATCAGTGTACTCTACGTGGAGTACCGTActagaaaggaaaaggagaacGCGAGCTTTAAGAACCATGTTATTCAGTGGTTTGAAGTGCTTGATGGATTATTGGGTCCATATTGGAAAGCCGTGGGGCTTGCTTTCAACTGTACTTTCCTCCTCTTTGGATCTGTGATACAACTCATAGCATGTGCAAGTAACATCTATTACATAAATGACAAATTGGACAAACGCACTTGGACTTACATCTTTGGAGCTTGCTGTGCTACCACTGTGTTTATTCCCTCTTTCCATAACTACCGTATTTGGTCATTTCTTGGTCTTGGAATGACAACCTACACAGCATGGTACTTGGCCATAGCCGCTCTCATTCATGGCCAGACGGAGAATGTGACACACTCAGGGCCAACGAAGCTGGTATTATACTTCACCGGAGCCACTAACATTCTATACACGTTTGGTGGACATGCCGTGACTGTGGAGATCATGCATGCCATGTGGAAGCCACAGAAGTTCAAGTACATTTATCTCTTGGCTACACTTTACGTTTTCACCCTAACCCTTCCTTCTGCTGCTGCCGTTTACTGGGCCTTTGGAGATGAGCTTCTCAACCATTCCAATGCCTTCTCTCTCCTCCCCAAGACCCGCTTCCGTGATGCTGCCGTTATCCTTATGCTCATTCACCAGTTCATCACGTTTGGATTTGCATGTACACCACTGTACTTTGTGTGGGAGAAGGTAATTGGGATGCATGATACGAAGAGCATTTGTTTGAGGGCACTGGCGAGATTGCCAGTGGTGATTCCCATATGGTTCTTAGCTATAATTTTCCCCTTCTTTGGGCCCATTAACTCGGCAGTTGGAGCTCTGCTGGTTAGCTTCACTGTCTACATCATCCCCTCCTTAGCCCATATGCTCACTTACAGAAAAGCTTCTGCAAGACAGAATGCTGCTGAGAAGCCTCCTTTCTTTATGCCAAGCTGGACTGCTATGTATGTCTTTAATGCTTTTATTGTGGTGTGGATTTTTGTGGTTGGGTTTGGGTTTGGAGGATGGGCCAGCGTGACCAACTTTGTCAGGCAAATTGACACTTTTGGGCTCTTTGCCAAGTGCTATCAATGCAAGCCACCAACTCCGCCACCGGCTGCGGCGGCACCACCACCTCATGCTCATCACTG 1454 0.4546 MLPQKQAEEAIVTNFTETEHEGAREEEKEQDHSIFSLKSVLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGLLFQVFYGLIGSWTAYLISVLYVEYRTRKEKENASFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALIHGQTENVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSAAAVYWAFGDELLNHSNAFSLLPKTRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFMPSWTAMYVFNAFIVVWIFVVGFGFGGWASVTNFVRQIDTFGLFAKCYQCKPPTPPPAAAAPPPHAHH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00253 484 PANTHER AUXIN INFLUX TRANSPORTER 3 470 - -
Bva02g00253 484 PANTHER OS05G0424000 PROTEIN-RELATED 3 470 - -
Bva02g00253 484 Pfam Transmembrane amino acid transporter protein 43 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00253 Bva-Chr2 4041593 4046935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00253 4 484 Organic Solute Cotransporters AT2G21050 76.715 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00253 K13946 - tcc:18597575 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00253 02 4041593 4046935 Bva02g00253 02 4041593 4046935 ECH