Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00243 ATGGGAATGTTATGTGGAGCTGTGACACTGATAGCATTTGGTAGTACTTCACAACCTTCAGCGTTTGTTAGATATCAGTTGAAGGAGAAAGTAAGAAGAAGTAGAGAGGTCAGCACTGAgcttcaaaacaaagaaagagaagagacgGAGCACCAAAACCGACAAGAGGGTGAAGAAGACAAAGAGATCAGCTCTGAGCTTCAAAACCgagatgaaaatggaaacatATCTGATAGCAACGAGGAAATAATAGAGGAAAATCAAAACCCAGATGATagcagagaaagaagagacaCAGACACCAATTCTGCAGATCAAAACAAAGAGGATTCcaaggaaagaagagaaatcagCTCAGAACAGGAAGACGTTGAACAAAATCAGGGAAAGCTTCCTGTTAATCTCAGTAGTAATCTCTGGATTATGAGTGCTTCTATGTTTGGAGCTTTTCTAGGCAGCTTTTTCCCTACAGGCAATGAAACTCAATGGAAAGATCCATTCAAGGTTGCTCCATTGTTCCTGGGAGTTGCTCATCTATTATTTTACTCTGGCTGCTTCTGCTACAGCTTTGAAGAACCACGTGGAAGCCCTCTGCAAAAAATTTACAGAGTCTTCGTTGCAGCtctaaggaaaagaaaactgaaataCCCGGATTCCGAAGGGGAATACAACTGTGAGaacaatgaaagaaatttctcttttccaaGGAAGACTGGAGATGGTTCAATTCGGCTGAAACCTCAAGTTCCAAGACTATGGAGATGGCTGGACAAAGCTGCTATAAAAAGTGGGGAAGGTGAAAAACAAAGTAAGAATGGAGAGATCTGCAGTGTCGATGAAGTAAGGGAAGTAAAGCACTTTTCTTCACTAATGCATATGTCATTCACTTTTTGGCCATTTAGTTTGGTGCTAGCTTCAGCCAACACTTTCTTTGTTGAGCAAGCTGGTACCTTAAAGCCTAATTTCAatgtcaattatttatttgtcatcaGTTCCGTGGTGAGTTCTACAACCGACAAATTGTTCAACTTAAAGAAATTagataaacataaacatgGAGTCTCAATTGTGAGAATTGGTGTAGGGATGGTGTGTGCTGTGGTTTGTTGCTTGGTGGCGGGGCTGTTGGAGCTTCATAGACTTTCTTtagcaagaaaagaaggaattgTTCAAAGCCGAGGCAAACAAGTCTCCATGGGTATAGCAGTGTTAATCCCCCAGTTTTTGCTTATGGGGCTAATGGAAGGACTTGCTCAGAAAGGGCTCGAGGAATTTTACTCTAATTATGTGCCTGAATCAATGGAGGGGTTTGTACAGCCCTTCGCTGAACTTGTTTCTGGTACAGGGAAGCTTCTAACCCTACCATGTATTTGGATTTTCACACCTTGGTTCAAGGATTCCATTAACAATAGCCATTTGGACAGGTATTTTCTAATGCTAGCAGGATTGAATTTTCTAGCCCTATGCTGGTTTGTCTACTATTCCTGGAATTACGCATATCATGAGCCATATCCAAATGATGAAGAATTAGGAAATGATGATGAAGGAGGCCAGGAGGAAAAGTGTCAGGGATATTA 1577 0.3703 MGMLCGAVTLIAFGSTSQPSAFVRYQLKEKVRRSREVSTELQNKEREETEHQNRQEGEEDKEISSELQNRDENGNISDSNEEIIEENQNPDDSRERRDTDTNSADQNKEDSKERREISSEQEDVEQNQGKLPVNLSSNLWIMSASMFGAFLGSFFPTGNETQWKDPFKVAPLFLGVAHLLFYSGCFCYSFEEPRGSPLQKIYRVFVAALRKRKLKYPDSEGEYNCENNERNFSFPRKTGDGSIRLKPQVPRLWRWLDKAAIKSGEGEKQSKNGEICSVDEVREVKHFSSLMHMSFTFWPFSLVLASANTFFVEQAGTLKPNFNVNYLFVISSVVSSTTDKLFNLKKLDKHKHGVSIVRIGVGMVCAVVCCLVAGLLELHRLSLARKEGIVQSRGKQVSMGIAVLIPQFLLMGLMEGLAQKGLEEFYSNYVPESMEGFVQPFAELVSGTGKLLTLPCIWIFTPWFKDSINNSHLDRYFLMLAGLNFLALCWFVYYSWNYAYHEPYPNDEELGNDDEGGQEEKCQGY 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00243 525 MobiDBLite consensus disorder prediction 27 130 - -
Bva02g00243 525 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 137 492 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva02g00243 525 Pfam POT family 161 452 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva02g00243 525 Coils Coil 27 61 - -
Bva02g00243 525 MobiDBLite consensus disorder prediction 87 123 - -
Bva02g00243 525 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 137 492 - -
Bva02g00243 525 Gene3D MFS general substrate transporter like domains 100 505 IPR036259 -
Bva02g00243 525 MobiDBLite consensus disorder prediction 27 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00243 Bva-Chr2 3847270 3848847 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00243 138 510 Organic Solute Cotransporters AT3G54450 25.441 1.27e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00243 - K14638 ccaj:109818666 240.736