Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00237 ATGATGATATTTTATCTCCATGATTCATATGAGAAGCCAAATCTTCGGAGAGATGTTATGGTTGTGAATCTGCTTGATGGGGCATCTATTGTATTATCTGTTGTTGTTGCTCATATCTCAGAAGCCTATGCCGGCTGTTTCAATATGATTATCTTATGCACATCATCCTATGTTATGGTTTCTGCTTTGTTGATGGGAACTgcttatctattattttatttagggtTCATCTTCTATCACTATGAAACACCTATAGGAAGCAGCCCTCTTGCTAGCATCCACAGGGTCTTCATAGCAGCAATATGGAAATTAAACTTCAAGTTCCCTGAATCAGCTGAAAATTATTACTGGAAGGACGAAAAACCTACTGGTTTGTACTCGAGAAGAGAAGGTACCCAGCTTCACTTGTTACCTCATGTTCCATCACTCTTCAGATTCTTAGACAAAGGTTCTATAATCAGAGAGGAATCTGATTTAAGTCAAGAAgagcaagaaaagaatggGGAGCTTTGCACAGTGAAAGAAGTGAGAGAAGTTAAGCACATCTTTCCGGCAGTGTATTTGGGGTTAACGTTTCTGGCATACAGTTTGGTTGCTGCTTGCGGAGATACTTACTTTCTTCTGCAAGAAAGTaacttgaataaaaaaattggaaaatttaCCCTTCCTGtctcttttctatttgtaTTCAAATCCTTTGTACGTGATGTTGTCACATTGATTTTCTGGAGCTTTAGACTAACACAGCAGCGAATCACGATTTTGAGGATTGGCGCTGGGTTGTTTTGTGCAGTTCTATGCTGTATCACTGCTTGGCAGGATGAATTACATAGGCTCGGATTGATCAAAAAAGAGGGAGTGCTTGAAAATCCAGATAAGACTCTCTCCTTGGGCATTTGGGTGCTGATCCCTCAGTACTTCCTGATAGGCTTAATGGAAGGACTTGCAGAGAATGGGCTTGAGAAATTCTACCACAATCAAGCCTCAAAATCATTACAGAACTTTGGGATGTCATTCAGTGTAATGGTGCTGGGTTTTGGGAATTTCCTCAGCATACCTTGTGTGTTAATTTTTGGGAGTTGGTTCAAGGAAACCATTAACACTAGTCAGCTGGATAGATATAACTTGATGGAAGGCTATTCAGAGGAACAAGAATTGGGTGACAATATAAAATCCTTGAAAGCCATTAAAGAAGCTTTACGTGATCAATTTGATCCAATAGAGCTAGTACTCTCGTGGATCTA 1244 0.377 MMIFYLHDSYEKPNLRRDVMVVNLLDGASIVLSVVVAHISEAYAGCFNMIILCTSSYVMVSALLMGTAYLLFYLGFIFYHYETPIGSSPLASIHRVFIAAIWKLNFKFPESAENYYWKDEKPTGLYSRREGTQLHLLPHVPSLFRFLDKGSIIREESDLSQEEQEKNGELCTVKEVREVKHIFPAVYLGLTFLAYSLVAACGDTYFLLQESNLNKKIGKFTLPVSFLFVFKSFVRDVVTLIFWSFRLTQQRITILRIGAGLFCAVLCCITAWQDELHRLGLIKKEGVLENPDKTLSLGIWVLIPQYFLIGLMEGLAENGLEKFYHNQASKSLQNFGMSFSVMVLGFGNFLSIPCVLIFGSWFKETINTSQLDRYNLMEGYSEEQELGDNIKSLKAIKEALRDQFDPIELVLSWI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00237 414 Gene3D MFS general substrate transporter like domains 57 379 IPR036259 -
Bva02g00237 414 Coils Coil 383 403 - -
Bva02g00237 414 Pfam POT family 60 356 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva02g00237 414 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 32 377 - -
Bva02g00237 414 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 32 377 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00237 Bva-Chr2 3785422 3787595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00237 59 374 Organic Solute Cotransporters AT2G37900 30.060 3.04e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00237 - K14638 qsu:112027022 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00237 02 3785422 3787595 Bva02g00237 02 3785422 3787595 ECH