Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00078 ATGACGACCATGGAGAGCTTGATTGGCTTGGTGAACCGCATACAGAGAGCTTGTACTGTGCTGGGTGATTATGGAGGTGATGAcaatactttttcttctttatggGAAGCTCTTCCTTCTGTTGCTGTTGTGGGTGGACAGAGTTCGGGAAAGTCTTCAGTTTTGGAGAGCATTGTTGGCCGTGATTTTCTTCCTAGAGGATCAGGGATTGTTACAAGACGTCCTTTGGTGTTGCAGCTTCATAAGACAGACGAAGGGGCGCAAGAGTATGCTGAGTTCCTTCACTTGCCGAGGAGAAAGTTCACGGATTTTTCCCTGGTCCGCAAGGAAATTTCAGATGAAACTGATAGATTAACTGGgaagacaaaacaaatatcACCTGTTCCAATTCACCTGAGCATCTATTCTCCAAATGTTGTCAACCTAACTTTAATTGATTTGCCGGGTTTGACAAAAGTTGCTGTAgAGGGTCAGCCAGAGAGTATTGTTCAAGACATTGAAGTAATGGTTCGATCTTATGTTGAGAAGCCTAATAGCATTATACTAGCAATATCACCAGCCAATCAAGACATTGCAACCTCTGATGCAATTAAACTTTCCAGGGAAGTGGATCCCACagGTGAAAGGACATTTGGTGTCTTGACAAAGCTGGATTTGATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGAAGATCTTACCGTCTGCAACATCCATGGGTCGGTATTGTAAATCGATCCCAAGcagatatcaataaaaatgttgaTATGATTGTAGCTAGACGCAAGGAGCGTGAGTACTTTGCAACCAGTCCTGACTACGGGCACTTAGCCAATAAAATGGGTTCAGAATACCTTGCAAAACTCCTCTCACAGCAATTGGAGTCAGTAATTAGAGCTCGAATTCCTAGTATAACatctttgataaataaaagtattgatGAACTTGAATCAGAAATGGATCATCTTGGGAGACCTATTGCTCTTGATGCTGGGGCTCAACTATACACTATACTTGAACTGTGTCGTGCATTTGACAAGATATTCAAGGAGCATTTAGATGGAGGGCGGGCTGGAGGAGATAGAGTATATAATGTCTTTGACAATCAGCTGCCTGCTGCTTTAAGAAAGCTTCCTTTTGACCGGCATCTTTCTCTTCAGAATGTGAGGAAAGTGGTGTCAGAGGCTGATGGTTATCAGCCTCACTTGATTGCGCCTGAGCAAGGTTACCGCCGGCTGATTGAGAGTTCTCTCAATTACTTTAGGGGCCCTGCTGAAGCTTCTGTGGATGCTGTTCACTTCGTCTTAAAAGAACTTGTGAGGAAATCAATAGCAGAAACCCAGGAACTGAAGCGTTTCCCAACACTTCAAGCTGAAATAGCTGCAGCTGCAAATGAAGCTTTAGAAAGGTTCCGCGAAGAGAGTAAGAAAACAACTGTTCGGCTTGTAGACATGGAATCTTCATATCTCACTGTCGAATTCTTTAGGAGACTTCCTCAAGAAGTGGAGAGAACTGGAAATCCTGCTGCTCCTCCTCCTACTGTAGATAGGTTTTCAGAGGGGCACTTCAGGAGGATTGGAACAAATGTGTCATCCTATATTAATATGGTGTCAGATACACTCAGGAACACAATTCCAAAGGCTGTGGTATATTGTCAAGTCAGAGAAGCAAAACAGTCATTGCTAAACCAgttctacatatatattgggAGGAAAGAGGGTAATCAACTATTGCAGCTGTTAGATGAAGACCCTGCATTGATGGAGAGGAGACAACAATGTGCTAAGAGGCTTGAACTGTACAAGGCAGCAAGGGATGAAATTGATTCTGTTTCCTGGACCCGATG 1850 0.4157 MTTMESLIGLVNRIQRACTVLGDYGGDDNTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDEGAQEYAEFLHLPRRKFTDFSLVRKEISDETDRLTGKTKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVQDIEVMVRSYVEKPNSIILAISPANQDIATSDAIKLSREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARRKEREYFATSPDYGHLANKMGSEYLAKLLSQQLESVIRARIPSITSLINKSIDELESEMDHLGRPIALDAGAQLYTILELCRAFDKIFKEHLDGGRAGGDRVYNVFDNQLPAALRKLPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIESSLNYFRGPAEASVDAVHFVLKELVRKSIAETQELKRFPTLQAEIAAAANEALERFREESKKTTVRLVDMESSYLTVEFFRRLPQEVERTGNPAAPPPTVDRFSEGHFRRIGTNVSSYINMVSDTLRNTIPKAVVYCQVREAKQSLLNQFYIYIGRKEGNQLLQLLDEDPALMERRQQCAKRLELYKAARDEIDSVSWTR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00078 616 PANTHER DYNAMIN 3 615 IPR022812 -
Bva02g00078 616 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 304 IPR030381 GO:0005525
Bva02g00078 616 Gene3D - 4 313 IPR027417 -
Bva02g00078 616 SMART GED_2 519 612 IPR003130 GO:0003924|GO:0005525
Bva02g00078 616 Pfam Dynamin central region 225 492 IPR000375 -
Bva02g00078 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 312 IPR027417 -
Bva02g00078 616 Pfam Dynamin family 41 216 IPR045063 -
Bva02g00078 616 ProSiteProfiles GED domain profile. 524 616 IPR020850 -
Bva02g00078 616 CDD DLP_1 38 304 IPR001401 GO:0003924|GO:0005525
Bva02g00078 616 SMART dynamin_3 4 255 IPR001401 GO:0003924|GO:0005525
Bva02g00078 616 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
Bva02g00078 616 Gene3D Dynamin, middle domain 326 580 - -
Bva02g00078 616 PRINTS Dynamin signature 63 80 IPR022812 -
Bva02g00078 616 PRINTS Dynamin signature 205 221 IPR022812 -
Bva02g00078 616 PRINTS Dynamin signature 136 153 IPR022812 -
Bva02g00078 616 PRINTS Dynamin signature 186 204 IPR022812 -
Bva02g00078 616 PRINTS Dynamin signature 38 56 IPR022812 -
Bva02g00078 616 PRINTS Dynamin signature 228 247 IPR022812 -
Bva02g00078 616 Pfam Dynamin GTPase effector domain 522 612 IPR003130 GO:0003924|GO:0005525
Bva02g00078 616 PANTHER DYNAMIN-RELATED PROTEIN 1E 3 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00078 Bva-Chr2 1421013 1429085 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00078 - - cpap:110814826 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00078 02 1421013 1429085 Bva02g00078 02 1421013 1429085 ECH