Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01872 ATGTGGTACAGCAAGGTTATTATTGAGGATCCAGCTGGGTTGGAGGATGAGAAGGAGAAGCCATACAGCAAGAACAAGTATGTGGCTGTGATCAAAGCTGAGATTCTGAAGGGTTTTATCATTGGAGGGGTGAAGGCTGAGAAATTGAAGGCTCTGATAAATGGAGGGGTGAAGGGAGAAAATCTGAGGCTGCTTATGATTGCAAGCTCAAAATCGTCACGCTTCAAGTTGTGGGCACTTCGAGCCATTTATCTGCTCATGTTTTGGGCCATGCTAATGCAGCTGAAGGGCCTTGGTGACAGGTTAACGCCAAGCTTGTTTAGGGCTCAGATTGATCACTCTCTTCCACCTGAAAGGATCTATGAGAATAATGGATATTTGATGGTATCTTCCAATGGAGGATTGAATCAAATGCGAGCTGGAATCTGTGACATGGTCACCATTGCAAGATATTTAAATGTCACTCTTATAGTTCCTGAATTGGATAATACATCCTTTTGGAATGATCATAGCCAATTCCAAGACATATTTGATGTGGATTATTTCATCGCATCTTTGAGAGATCAAGTTAGAATACTGAAAGAATTGCCTCcccaacaaaagaagaaggtgGAAACAGAGTCACTCTATTCCATGCCACCCATTAGCTGGTCCAACATGACATATTACTATGTTGTGATTCTTCCTCGTATAAAAACATACGAAGTTGTTCACTTCACTAAATCTGATGCAAGGCTTGCAAATAACGGGATCCCTGATGAAGTTCAGAAACTGCGTTGCCGAGTGAACTACCATGCTATGAGATTTGCTCCCCCAATTGAGCAATTGGCTAAGAAGATTGTGAGAATTCTTAAGGAGAGAGGACCTTACTTGGCCCTCCATCTTAGATATGAAATGGACATGATAGCCTTCTCTGGTTGCAATGAAGGTTGTAGCGAGGAAGAGATTGATGAATTGACAAAAATGAGATATGACTATGTATGGTGGAAAGAGAAGGAGATAGATTCCGTGAAGAAAAGATTAGATGGTTTATGCCCTCTAACTCCTGAAGAAACTGCTCTAGTATTGCGAGCATTGGACATTGATCGTAACATACAAGTCTATATTGCTGCTGGGGATATATACAAATCAGGCAAAAGAATGGCAGCACTCAAAGAGGCTTTTCCCAATTTGGTTAAGAAGGAGACATTGCTGGAGCCCTCAGAACTTGAACCTTTCAAGAACCATTCTAACCAAATGGCAGCATTGGATTATTATGTGTCAATAGaaagtgatatttttgttCCCACGTACAAAGGCCACATGGCAAAATTGGTTGAAGGACACAGAAGGTATTTGGGTTTCAGGAAGACAATTCTTTTAGACAGAAAGCTTCTGGTTGAGCTGATAGACCAATACAAGAATGGGACAATAAACTGGAACCAGTTCTCTGCTGAAGTGAAGGCTGCTCATGCAGATCATTTAGGGAACCCAACAGCAAGATCAGTGGTGCCTGGTAAACCCAAATTAGAGGATTATTTCTACACAAACCCACAAGAGTGCACTGATCTTCATGAGATTTG 1562 0.4072 MWYSKVIIEDPAGLEDEKEKPYSKNKYVAVIKAEILKGFIIGGVKAEKLKALINGGVKGENLRLLMIASSKSSRFKLWALRAIYLLMFWAMLMQLKGLGDRLTPSLFRAQIDHSLPPERIYENNGYLMVSSNGGLNQMRAGICDMVTIARYLNVTLIVPELDNTSFWNDHSQFQDIFDVDYFIASLRDQVRILKELPPQQKKKVETESLYSMPPISWSNMTYYYVVILPRIKTYEVVHFTKSDARLANNGIPDEVQKLRCRVNYHAMRFAPPIEQLAKKIVRILKERGPYLALHLRYEMDMIAFSGCNEGCSEEEIDELTKMRYDYVWWKEKEIDSVKKRLDGLCPLTPEETALVLRALDIDRNIQVYIAAGDIYKSGKRMAALKEAFPNLVKKETLLEPSELEPFKNHSNQMAALDYYVSIESDIFVPTYKGHMAKLVEGHRRYLGFRKTILLDRKLLVELIDQYKNGTINWNQFSAEVKAAHADHLGNPTARSVVPGKPKLEDYFYTNPQECTDLHEI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01872 520 PANTHER OS02G0726500 PROTEIN-RELATED 32 515 - -
Bva01g01872 520 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 32 515 - -
Bva01g01872 520 CDD O-FucT_plant 126 451 IPR024709 -
Bva01g01872 520 Gene3D - 254 455 - -
Bva01g01872 520 Pfam GDP-fucose protein O-fucosyltransferase 126 446 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01872 Bva-Chr1 19182055 19185465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01872 122 512 Miscellaneous Gene Families AT2G37980 48.601 7.99e-129 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01872 K23280 - gmx:100818153 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01872 01 19182055 19185465 Bva01g01872 01 19182055 19185465 ECH