Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01860 ATGGCTCCGGTTCTGAGCAGAAGCTTGGCCACTGCCTCTCTCGCCCTTCCCTCTTCTTCACCCTTTATAGCGAGAAACACCCAGAGGACTTCGATCTTCAGAAGTACTTTGGTGCCTCAAAATAGctttagaaaagaattttccTGTGCTGGGTTGAACTGGAAGCTCCAGAAGAGGAACAATCGGATAGCTGTTCGGTGTGAGGCTGCAGTTGCAGAGAAGGAGGCATCTGATAGGGATGCTCCTGGTGAGAAGTTTGAATATCAGGCCGAGGTCTCTCGCCTGATGGACTTGATAGTTCATAGTCTATACAGCCACAAGGAAGTTTTCCTCCGAGAACTTGTCAGtaATGCAAGTGATGCTTTGGACAAATTGAGATTCTTAAGTGTGACAGAGCCTTCTTTGCTTGGAGATGCCGGAGGTCTAGAGATACGAATCAAACCTGATCCAGACAATGGGACTATTACCATAACAGATACTGGTATTGGAATGACCAAAGAAGAGCTTATAGATTGTCTTGGGACTATTGCTCAGAGTGGCACTTCAAAGTTTTTGAAGGCTCTTAAGGAAAACAAGGATCTAGGGGCAGATAATGGTTTGATTGGTCAATTTGGTGTGGGGTTCTACTCTGCTTTTCTTGTTGCTGAGAGGGTGGTTGTTTCAACAAAGAGCCCCAGATCAGATAAGCAATATGTGTGGGAAGCTGTAGCTGACAGTAGCTCTTACGTGATAAGGGAAGAAACTGATCCTGAGAAGCTTCTACGCCGTGGCACACAGATAACACTCTACTTAAGATCGGATGACAAATATGAATTCTCTGAGCCTACCAAGATTCAGAGTTTGGTGAAGAATTACTCACAGTTTGTGTCCTTCCCCATCTATACATGGCAAGAAAAATCTAGAACTGTGGAGGtggaagaggaggaagaacCAAAAGAAGGGGAAGAACCAAAAGCAGAGCAGGGTGAGAAGACGATGAAAAAGAAGACTAAAACAGAAAAGTATTGGGATTGGGAGTTAGCAAATGAAACGAAGCCAATATGGatgaGGAATTCAAAAGAAGTTGAAAAGGATGAATACTATGAATTTTACAAGAAGGCTTTCAATGAATTCCTAGAACCAATTGCATACACTCACTTCACCACAGAGGGCGAGGTTGAGTTTAGAAGTATTCTCTACATACCAGGAATGGGGCCTCTTAACAATGAAGAAGTAATAAATCCTAAAACAAAGAACATACGACTGTATGTGAAACGTGTGTTCATATCAGATGATTTTGATGGTGAGCTGTTTCCACGGTACTTGAGCTTTGTGAAGGGTGTGGTGGACTCCGATGACCTTCCACTCAATGTATCTCGGGAGATCCTTCAAGAGAGCAGAATCGTAAGAATAATGAGGAAGAGACTTGTCAGGAAGGCATTTGATATGATTCAAGATTTATCTGAAAGGGAAGATAAAGAGGACTACAAGAAATTCTGGGAGAACTTTGGTAGGTTCTTGAAGTTGGGATGCATTGAAGACACTGGAAATCATAAGCGCATAACACCATTGTTGAGATTTTACACTTCTAAAAGTGAGGAGGAACTGAAAAGTTTAGATGATTATGTTGAAAACATGGGTGAAAATCAAAAGGCGATCTATTACCTAGCAACTGATAGCTTGAAAAGTGCCAAGACTGCTCCATTTTTGGAGAAACTGGTGCAGAAAGATATTGAGGTTCTGTATTTGATTGAACCTATTGATGAGGTCGCAATTCAAAATCTACAAacatacaaagaaaagaaatttgttgaCATAAGCAAGGAAGATCTTGAACTAGgTGATGAGGATGAAGTCAAGGAAAGGGAAACTAAACAAGAATACAATGTACTTTGTGATTGGATAAAACAACAGCTTGGTGATAAGGTGGCcaaagttcaagtttcaaagcGCCTGAGCTCATCTCCTTGTGTGCTTGTATCTGGCAAGTTTGGATGGTCCGCAAATATGGAGAGATTAATGAAAGCACAAGCTCTCGGAGACACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGGTTAATCCAGACCATCCTATTATCAAAGACTTGAATGCTGCATGCAAGAACGCCTCGGACAGCGACGATGCTAAGAGAGCTGTTGATCTCTTGTATGATACAGCACTGATCTCTAGTGGATTTACGCCTGACAGCCCAGCTGAGTTGGGAAATAAGATTTATGAAATGATGGCCCTGGCCCTGGGAGGAAGATGGGGTAGGTCAGAAGAAGAGGGGCCTGGTTCATCTGCTGAACCTGATGCCAACACGGTCGAAGCTTCAGAGCCAGAAGTGGTTGAACCTTCAGAAGTAAGAACAGAAAGTAGTGATCTTTGGACAACTGAGAATGATCCTTGGACAACTGATTA 2411 0.4127 MAPVLSRSLATASLALPSSSPFIARNTQRTSIFRSTLVPQNSFRKEFSCAGLNWKLQKRNNRIAVRCEAAVAEKEASDRDAPGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGGLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAERVVVSTKSPRSDKQYVWEAVADSSSYVIREETDPEKLLRRGTQITLYLRSDDKYEFSEPTKIQSLVKNYSQFVSFPIYTWQEKSRTVEVEEEEEPKEGEEPKAEGEKTMKKKTKTEKYWDWELANETKPIWMRNSKEVEKDEYYEFYKKAFNEFLEPIAYTHFTTEGEVEFRSILYIPGMGPLNNEEVINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKAFDMIQDLSEREDKEDYKKFWENFGRFLKLGCIEDTGNHKRITPLLRFYTSKSEEELKSLDDYVENMGENQKAIYYLATDSLKSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEVKERETKQEYNVLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEVNPDHPIIKDLNAACKNASDSDDAKRAVDLLYDTALISSGFTPDSPAELGNKIYEMMALALGGRWGRSEEEGPGSSAEPDANTVEASEPEVVEPSEVRTESSDLWTTENDPWTTD 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01860 802 Gene3D - 69 314 IPR036890 -
Bva01g01860 802 Gene3D - 601 748 IPR037196 -
Bva01g01860 802 ProSitePatterns Heat shock hsp90 proteins family signature. 104 113 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bva01g01860 802 Gene3D - 514 600 - -
Bva01g01860 802 Gene3D - 341 513 - -
Bva01g01860 802 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 107 265 IPR003594 -
Bva01g01860 802 PIRSF HSP90_HTPG 57 788 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva01g01860 802 MobiDBLite consensus disorder prediction 786 802 - -
Bva01g01860 802 Hamap Chaperone protein HtpG [htpG]. 72 745 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva01g01860 802 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 23 786 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva01g01860 802 SUPERFAMILY Ribosomal protein S5 domain 2-like 343 601 IPR020568 -
Bva01g01860 802 MobiDBLite consensus disorder prediction 302 325 - -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 105 127 IPR020575 -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 256 273 IPR020575 -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 275 293 IPR020575 -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 84 104 IPR020575 -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 172 189 IPR020575 -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 154 171 IPR020575 -
Bva01g01860 802 PRINTS 90kDa heat shock protein signature 201 223 IPR020575 -
Bva01g01860 802 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 84 299 IPR036890 -
Bva01g01860 802 MobiDBLite consensus disorder prediction 752 802 - -
Bva01g01860 802 CDD HATPase_Hsp90-like 93 289 - -
Bva01g01860 802 Pfam Hsp90 protein 271 763 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva01g01860 802 PANTHER HEAT SHOCK PROTEIN 90-5, CHLOROPLASTIC 23 786 - -
Bva01g01860 802 SMART HKATPase_4 106 268 IPR003594 -
Bva01g01860 802 SUPERFAMILY HSP90 C-terminal domain 623 744 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01860 Bva-Chr1 19100509 19106155 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01860 K09487 - mnt:21409153 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01860 01 19100509 19106155 Bva01g01860 01 19100509 19106155 ECH