Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01835 ATGGGTGATGATTTGGGTCCTGATTTGATTAGTGATCTTCCTCAAAGCATTATAGAAAGTATTCTGATACAACTGCCAATAAGAGAAGCTGTGAAAACCAGCATTTTGTCTAGTAAATGGAGGTACAAATGGGCTACTATCAATCAACTtgtatttgatgaaaaatgtGTTCCTTACTGTAATGACCGGCTTGTTGTGGAGAAAAGCCTCATCAAATTTATCACCTGGCTGTTATTTCTTCATCAAGGACCAATCcataaattccaaatttcaaaCCCACACTTGCAGAGCTGCCCAGAAATAGACCAATGGCTTCTTTTCCTCTCAAGGAATGATATCAAAAAATTGGTTCTTGAATTAGGAGAAGGTGAATGGTTTAGAATACCTTCATGCCTTTTCAATTGTAAGAAATTGACTCATCTGGAGCTCTACCGTTGTGAGTTGGATCCACCTCTTACTTTTAAAGGGTTTATGTTCTTGAAGAGCCTCATCCTTCATCAAGTTTTGATTTCTCCTGAGGCAATCGAGAGTCTTATTTCAAGCTGCCCTCTTTTGGAGAGTTTGTCACTGTCATACTTTGATAGTTTAGCTCTTTGTATTCGAGCTCCAAATCTCAAATGCTTGTATCTTGAAGGTGAGTTCAGGGATATATGTCTTGAAGACACTCCACTTCTGGTTGAAGTATCTGTTGCAATGTATATGACTGAAGATATTGCTGAGCACCACGAGCAAAGTCTCGATTGCAATTTCATCAAGTTTCTTGGCAGTGTACCTTATCTTGAGAGGCTCATTGGACATATCTACTTCACCAAGTATTTGAGTTTAGGTAATTATCCAGAAAGCCTTCCAATAATGTACAACCATCTAAAGATTATTGAATTGTATCAAGTAAGTTTTGAGGACATGAAAGAGATACTTGTTGTCATTCGCTTGATCACGAACTCTCCAAATCTACAGCAACTTCATATTTCAgGTTCATCCACCATACCATCTGCTACAGATGTCCCTGATTTGGACTTTTGGAAGAAAGAGTGCGCTTCAGAGTGTACATTGAGACAGCTTAAAATTGTGAAGTTAGCAGATATGAGCGGTGTGCCGCATGAGAtggaatttatcaaatttttgctTGCCAGCTCCCCTGTGCTTGAATCAATGACTGTCATGCCTTGTGtgtatattattgaaaatcaaatgaaaatgttgaTTGAAATGTTGAAATTTCAACGAGCTTCAGCTCGAGCAGCAGTAGATTTCATTCGTGATTG 1265 0.3676 MGDDLGPDLISDLPQSIIESILIQLPIREAVKTSILSSKWRYKWATINQLVFDEKCVPYCNDRLVVEKSLIKFITWLLFLHQGPIHKFQISNPHLQSCPEIDQWLLFLSRNDIKKLVLELGEGEWFRIPSCLFNCKKLTHLELYRCELDPPLTFKGFMFLKSLILHQVLISPEAIESLISSCPLLESLSLSYFDSLALCIRAPNLKCLYLEGEFRDICLEDTPLLVEVSVAMYMTEDIAEHHEQSLDCNFIKFLGSVPYLERLIGHIYFTKYLSLGNYPESLPIMYNHLKIIELYQVSFEDMKEILVVIRLITNSPNLQQLHISGSSTIPSATDVPDLDFWKKECASECTLRQLKIVKLADMSGVPHEMEFIKFLLASSPVLESMTVMPCVYIIENQMKMLIEMLKFQRASARAAVDFIRD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01835 421 Pfam FBD 346 387 IPR006566 -
Bva01g01835 421 PANTHER - 5 391 - -
Bva01g01835 421 PANTHER F-BOX PROTEIN-LIKE 5 391 - -
Bva01g01835 421 Gene3D Ribonuclease Inhibitor 89 408 IPR032675 -
Bva01g01835 421 SUPERFAMILY RNI-like 98 332 - -
Bva01g01835 421 SUPERFAMILY F-box domain 6 82 IPR036047 GO:0005515
Bva01g01835 421 SMART 9598neu4hmm 348 419 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01835 Bva-Chr1 18915269 18917375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01835 5 214 EF-hand Containing Proteins AT5G41840 25.301 7.88e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01835 - - tcc:18610121 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01835 01 18915269 18917375 Bva01g01835 01 18915269 18917375 ECH