Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01808 ATGGCGGCAAGCACACATTATCGTTTCCCTTGGTCTAAATTTTTTCGTGCTGAAGCAGCAGCGCCAATGCTCGCCCGTCGGGTATTTAGGGCTCGTGGATTGGcagatgatgataataattcAGTGGCTAGTCCAGAGCCAGAATCAGATAATTTAGAAGCGGGTGCTACTATCGACTTAAGACTTCCACGAAGAAGTTTGCTTGTACAGTTTACTTGCGACTTATGTGGTGAAAAGACAAAAGGGCTCATAAACCAATTAGCTTACGAAAGGGGAGCTATCTTTGTACAGTGTGCAGGATGTCTTCGGTATCACAAATTAGTCGATAACCTTGGTCTTATCCCAGAGTATGACTTTCAGGAGGAAACCAACGTGGAATCAGAAATAGATCAAGTTTG 398 0.4246 MAASTHYRFPWSKFFRAEAAAPMLARRVFRARGLADDDNNSVASPEPESDNLEAGATIDLRLPRRSLLVQFTCDLCGEKTKGLINQLAYERGAIFVQCAGCLRYHKLVDNLGLIPEYDFQEETNVESEIDQV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01808 132 Pfam DNL zinc finger 69 127 IPR007853 GO:0008270
Bva01g01808 132 PANTHER F24J5.3 23 131 - -
Bva01g01808 132 MobiDBLite consensus disorder prediction 36 55 - -
Bva01g01808 132 ProSiteProfiles Zinc finger DNL-type profile. 62 132 IPR007853 GO:0008270
Bva01g01808 132 PANTHER UNCHARACTERIZED 23 131 IPR024158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01808 Bva-Chr1 18783204 18784754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01808 K17808 - gmx:100786955 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01808 01 18783204 18784754 Bva01g01808 01 18783204 18784754 ECH