Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01762 ATGGCTCCCAAATCGGATAGCGCCGAAGCGATTGTGTTGAACTTCGTGAATGAGCAAAATAGGCCATTAAACTCGCAAAATGTGGCGGATTCATTGCAAAAGTTCAACCTCAAGAAGGCAGCGGTGCAAAAGGCATTGGACAATCTTGCCGATAATGGGCGTATTTCATTCAAGGAGTATGGTAAGCAGAGGATATACATTGCCCGGCAAGATCAATTTGATATTCCAAACAACGAAGAGCTTAATCACATGAAGGAACAAAATGCCAAACTGCAACAACAGCTGGATGCACAGAAAAAGGCTATTAGCGAGGTTGAAGCAGAAATTAAAGCATTGCAGTCAAATTTAACACTGGAACACATCCGCGAAAGAGAAGCCAAACTGAGAATTGAGGTTGAAGAAATGGAGAACAAATTGGGTAAGTTGCGTGGAGGTGTTACTCTGGTGAGGCCAGAAGAACGCAAGGTAGTTGAGGAGATGTACTCAGAGAAACTAAGTCAGTGGAGAAGACGTAGAAGAATGTTCAAAGACATATGGGATGCCATTACTGAGAACTCACCCAAAGATCCCAAAGAATTCAAGGAGGAAATTGGAATAGAATACGATGAAGATGTTGGTGTGAGCTTGCAATCATTTAGTGACCTGCTGCAACATGGTAAGAAGCGGCAAAGGCAACACTG 680 0.4309 MAPKSDSAEAIVLNFVNEQNRPLNSQNVADSLQKFNLKKAAVQKALDNLADNGRISFKEYGKQRIYIARQDQFDIPNNEELNHMKEQNAKLQQQLDAQKKAISEVEAEIKALQSNLTLEHIREREAKLRIEVEEMENKLGKLRGGVTLVRPEERKVVEEMYSEKLSQWRRRRRMFKDIWDAITENSPKDPKEFKEEIGIEYDEDVGVSLQSFSDLLQHGKKRQRQH 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01762 226 Gene3D - 1 79 IPR036388 -
Bva01g01762 226 Pfam TBPIP/Hop2 winged helix domain 8 68 IPR010776 -
Bva01g01762 226 PANTHER TBP-1 INTERACTING PROTEIN 1 222 IPR040461 GO:0007131
Bva01g01762 226 Coils Coil 118 138 - -
Bva01g01762 226 Coils Coil 81 115 - -
Bva01g01762 226 Pfam Leucine zipper with capping helix domain 149 206 IPR040661 -
Bva01g01762 226 SUPERFAMILY "Winged helix" DNA-binding domain 6 74 IPR036390 -
Bva01g01762 226 Coils Coil 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01762 Bva-Chr1 18431177 18433145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01762 K06695 - pvy:116121090 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01762 01 18431177 18433145 Bva01g01762 01 18431177 18433145 ECH