Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01636 ATGGGTAATTACGTTTCTTGCACTCTGGCTCCTCCGATGATGAAGAACGCAAAAGCGGCGAGGGTGATCATCCCCTCCGGCGAAGTGAAGCAGTTCCGAGCAGCGGTGAAGGCGGCGGAGCTCATGCTTGAGTGCCCCAACTTTTTCTTAGCCAATTCTCGCTCCCTTCACATCGGTCGGAGATTCTCTGCTCTCAGCGCCGATGAGGAGTTGGAGTTTGGAAACCTCTACATCATGTTCCCGATGAGGAGAGTGAATTCCGTTGTCACGGCGGCCGACATGGCGGTGTTCTTTATGGCAGCGAACTCGGCGGCTAAGCGGATTTCCGGCGGGAAGGGGAGTGTGCAGCCGGAAAACGGCGGCGGGGTGACACAACAACAACAAGCCGTAGAGGAAAAATCAGAGCTTGTGAGTGGTGATAATGGAGTTCCAAGGTTGAGTATGGATGGAGTGGACTCTGGTTTTCAGCATAGATTATCTTATTGTAGGTCAAGAAAACCTGTTTTGGAGACTATAAGTGAAGAACCAATTTGCTCAAGATA 542 0.5148 MGNYVSCTLAPPMMKNAKAARVIIPSGEVKQFRAAVKAAELMLECPNFFLANSRSLHIGRRFSALSADEELEFGNLYIMFPMRRVNSVVTAADMAVFFMAANSAAKRISGGKGSVQPENGGGVTQQQQAVEEKSELVSGDNGVPRLSMDGVDSGFQHRLSYCRSRKPVLETISEEPICSR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01636 180 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 177 - -
Bva01g01636 180 MobiDBLite consensus disorder prediction 109 145 - -
Bva01g01636 180 MobiDBLite consensus disorder prediction 118 134 - -
Bva01g01636 180 Pfam PADRE domain 1 174 IPR025322 -
Bva01g01636 180 PANTHER DUF4228 DOMAIN PROTEIN 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01636 Bva-Chr1 17590251 17591038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01636 - - gmx:100794402 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01636 01 17590251 17591038 Bva01g01636 01 17590251 17591038 ECH