Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01608 atgtcaaatattaattatgtcaaTTATGGCATGCGCCGAGTtgcatttctttcaaaatgGTTCTTTGCATGTTTCCTGTTTTCATACCAAAACGCGCGTAGCCATTggcaaaagaggaaaagaggaAGTGATAAAACGACAACGTCTAACCCCGATTGCGTTCTTCAACCTCTAGCTCAGTGGCGCACTCATTCACAGCAGCATAAATTCCTCAGCCCAACTTTCGGCTTGGCTGTTACAGCTTCTTCTCGCATGAGTTCGAGTTCACTCTGCCGCCTCTCTTCTCCGGCCACCATCTCACGGCGCCTGCCACCTACCAATACCACGCTAGCATTCGATCGTGGAGCTCCGTCTTGCCTCTGCTTCACAGTTAATCATACAAGAGAATCAAAAATCAGGAGGATTGTTAAAATGTCTGCAACTGAAATTTCCAACACTAGATTATCATCTGACTCATTTACAATAAAGCCTCCCAGGCACCCCACTTATGATTTGAAGGGCATTATCAAGTTAGCCCTAGCAGAGGATGCTGGGGATCGAGGTGATATAACATGCAAAGCTACCATTCCATTTGACATGGAAGTGGAAGCCTATTTCTTGGCAAAGGAGGATGGTATTATTGCTGGGATTGCACTTGCAGAGATTATATTTCATGAGGTTGATCCTTCTTTGAAGGTGGAGTGGTCTCAAAAGGATGGAGATTATGTCCATAAAGGGCTCCAGTTTGGAAAAGTTCAtgGACGGGCACACAACATTGTTGTGGCTGAAAGGGTAGTTTTAAACTTTATGCAGAGGATGAGTGGTATTGCAACTCTGACTAAGGCAATGGCAGATGCAGCATCCCCTGCATATATACTGGAGACGAGAAAAACTGCTCCAGCTTTACGTTTGTTGGATAAGTGGGCAGTACTGATTGGTGGAGGTCGTAATCATAGGATGGGTTTGTTTGATATGGTGATGATAAAAGATAATCATATATCAATAGCCGGAGGTGTTACTAATGCCCTCAAAGCTGTTGACTTATATTTAGATCAAAATAACCTTCAGATGGAGGTTGAGGTTGAGACCAGAACGCTTGAGGAAGTGAAAGAGTTATTGCATCATGCATCCCAAACAAAGACTTCTTTGACCCGGATAATGTTGGATAATATGGTTGTACCACTACCAAATGGAGATGTGGATGTATCTATGCTAAAAGAAGCTGTGCAGTTGGTCAATGGAAGATTTGAGACTGAGGCATCAGGCAATGTTACTCTTGAAACAGTACATAAAATTGGACAAACTGGAGTAACCTACATTTCTAGTGGTTCACTGACTCATTCTGTAAAGGCACTTGACATCTCCCTGAAAATCGACACCGAGTTGGCACTCAAAGTTGGAAGGCGTACCGGACGAGCCTG 1400 0.4207 MSNINYVNYGMRRVAFLSKWFFACFLFSYQNARSHWQKRKRGSDKTTTSNPDCVLQPLAQWRTHSQQHKFLSPTFGLAVTASSRMSSSSLCRLSSPATISRRLPPTNTTLAFDRGAPSCLCFTVNHTRESKIRRIVKMSATEISNTRLSSDSFTIKPPRHPTYDLKGIIKLALAEDAGDRGDITCKATIPFDMEVEAYFLAKEDGIIAGIALAEIIFHEVDPSLKVEWSQKDGDYVHKGLQFGKVHGRAHNIVVAERVVLNFMQRMSGIATLTKAMADAASPAYILETRKTAPALRLLDKWAVLIGGGRNHRMGLFDMVMIKDNHISIAGGVTNALKAVDLYLDQNNLQMEVEVETRTLEEVKELLHHASQTKTSLTRIMLDNMVVPLPNGDVDVSMLKEAVQLVNGRFETEASGNVTLETVHKIGQTGVTYISSGSLTHSVKALDISLKIDTELALKVGRRTGRA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01608 466 Gene3D - 172 449 IPR037128 GO:0016763
Bva01g01608 466 Gene3D Aldolase class I 281 441 IPR013785 -
Bva01g01608 466 SUPERFAMILY Nicotinate/Quinolinate PRTase C-terminal domain-like 269 451 IPR036068 GO:0009435
Bva01g01608 466 Pfam Quinolinate phosphoribosyl transferase, N-terminal domain 179 267 IPR022412 GO:0016763
Bva01g01608 466 Pfam Quinolinate phosphoribosyl transferase, C-terminal domain 269 450 IPR002638 GO:0004514|GO:0009435
Bva01g01608 466 Coils Coil 345 365 - -
Bva01g01608 466 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 154 459 IPR027277 -
Bva01g01608 466 SUPERFAMILY Nicotinate/Quinolinate PRTase N-terminal domain-like 157 268 - -
Bva01g01608 466 CDD QPRTase 168 450 IPR004393 GO:0004514|GO:0009435
Bva01g01608 466 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 154 459 - -
Bva01g01608 466 TIGRFAM nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 169 451 IPR004393 GO:0004514|GO:0009435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01608 Bva-Chr1 17374852 17382822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01608 K00767 - gmx:100776131 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01608 01 17374852 17382822 Bva01g01608 01 17374852 17382822 ECH