Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01562 ATGTCTGATTATGGTAAGCTGGAAACTGATGTTCACATCAATGCTACTGCTGAGCAGTTCCATGAAATCTTCAGCAGCAGGACACACCACATAGCCAATGTTGCAGATAAGATAAAGGGTGTTGAAATGCACGAAGGAGACTGGGGCAACGTTGGTTCTATCCTAGGCTGGAATTATGTCCACGAGGGGAAACATTGTGTGGCAAAGGAATTGGTTGAAGCCATAGACCCAGACAAAAACTTGATCACTTTCAGAATCTTAGAGGGAGATCTTATGGAGCACTACAAGAGCTTCAAGATCACAATTCAAGTTTCTCCAAAGGATAAGGGCAGTGTGGCACATTGGACAtttgaatatgaaaagaagCACGGTCATGTTCCTGATCCTCATTCACTGGTTGAGTTAGGAATTGAGATGAGCAAAGAGATTGATGATCACCTTGCCCATGGTAAGTTGGAAACTGATGTTCACATCAATGCTACTGCTGAGCAGTTCCATGAAATTTTCAGCAGCAGGACACACCACATAGCCAATGTTGCTGATAAAATAAAGGGTGTTGAAATGCTTGAAGGAGAATGGGGCAAGGTTGGTTCTATCATAGTTTGGAATTATGTCCATGAGGGGAAACATTGTGTGGCTAAGGAATTGGTTGAAGCCATAGACCCAGACAACAACTTGAtcactttcaaaattttagaggGAGATCTTATGGAGCACTACAAGAGCTTCAAGATCACAATTCAAGTTTCTCCCAAGGATAAGGGCAGTGTGGCACATTGGACAtttgaatatgaaaagaaacatgGTCATGTTCCTGACCCTCACTCACTTGTTGAGTTAGGAATTGAGATGAGCCAAGCGATTGATGATTACCTTGCCTATGGTAAGTTGGAAACTGATGTCCACATCAATGCTACTGCTGAGCAGTTCCATGAAATTTTGTGTGGCAGGACACACCACATAGCCAATATTTCCTCTGATAAAGTAAAGGGTGTTGACATCCATGATGGTGTGTGGGGCAAAGTGGGCTCTATAATCATCTGGAATTATATCCAAGATGGGAAACACTGTACGGCTAAGGATTTGGTTGAAGCCATAGACCTGGACAAGAAATTGTTCACTCTCAGAGTTTTAGAGGGAGATATTCTGGAGGACTATAAGAGCTTCAAGATCACACTTCAAGTTAGTCCACAGAAGAAGGGCAGTGTGGTGCATTGGACCTTTGAATACGAAAAGAAATATGGTCATGTTACAGACCCTCACTCACTGTTGCAGTTAGCAAGTGAAGTGAGCAAAGACATCGATGCTCACCTTGCTCAGGCATA 1325 0.4151 MSDYGKLETDVHINATAEQFHEIFSSRTHHIANVADKIKGVEMHEGDWGNVGSILGWNYVHEGKHCVAKELVEAIDPDKNLITFRILEGDLMEHYKSFKITIQVSPKDKGSVAHWTFEYEKKHGHVPDPHSLVELGIEMSKEIDDHLAHGKLETDVHINATAEQFHEIFSSRTHHIANVADKIKGVEMLEGEWGKVGSIIVWNYVHEGKHCVAKELVEAIDPDNNLITFKILEGDLMEHYKSFKITIQVSPKDKGSVAHWTFEYEKKHGHVPDPHSLVELGIEMSQAIDDYLAYGKLETDVHINATAEQFHEILCGRTHHIANISSDKVKGVDIHDGVWGKVGSIIIWNYIQDGKHCTAKDLVEAIDLDKKLFTLRVLEGDILEDYKSFKITLQVSPQKKGSVVHWTFEYEKKYGHVTDPHSLLQLASEVSKDIDAHLAQA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01562 441 SMART Bet_v_1_2 151 295 IPR000916 GO:0006952
Bva01g01562 441 SMART Bet_v_1_2 296 441 IPR000916 GO:0006952
Bva01g01562 441 SMART Bet_v_1_2 2 150 IPR000916 GO:0006952
Bva01g01562 441 Gene3D - 1 148 IPR023393 -
Bva01g01562 441 Gene3D - 149 293 IPR023393 -
Bva01g01562 441 Gene3D - 294 440 IPR023393 -
Bva01g01562 441 CDD Bet_v1-like 295 439 - -
Bva01g01562 441 CDD Bet_v1-like 5 149 - -
Bva01g01562 441 PANTHER MLP-LIKE PROTEIN 423 294 438 - -
Bva01g01562 441 PANTHER MLP-LIKE PROTEIN 423 149 291 - -
Bva01g01562 441 PANTHER MLP-LIKE PROTEIN 423 1 147 - -
Bva01g01562 441 SUPERFAMILY Bet v1-like 294 440 - -
Bva01g01562 441 SUPERFAMILY Bet v1-like 1 147 - -
Bva01g01562 441 CDD Bet_v1-like 150 294 - -
Bva01g01562 441 PANTHER MLP-LIKE PROTEIN 34-RELATED 294 438 - -
Bva01g01562 441 PANTHER MLP-LIKE PROTEIN 34-RELATED 149 291 - -
Bva01g01562 441 Pfam Pathogenesis-related protein Bet v 1 family 149 292 IPR000916 GO:0006952
Bva01g01562 441 Pfam Pathogenesis-related protein Bet v 1 family 295 440 IPR000916 GO:0006952
Bva01g01562 441 Pfam Pathogenesis-related protein Bet v 1 family 5 148 IPR000916 GO:0006952
Bva01g01562 441 PANTHER MLP-LIKE PROTEIN 34-RELATED 1 147 - -
Bva01g01562 441 SUPERFAMILY Bet v1-like 151 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01562 Bva-Chr1 17045988 17050671 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01562 - - csat:104701730 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01562 01 17045988 17050671 Bva01g01562 01 17045988 17050671 ECH