Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01528 ATGTATCCGCCAAACCCAGATACTTCTGATCAGAAGCACCATGGTGCACCAACGCCATATACTCAGCTGCCGGCCACCGGTGTACAGGTGAGCTCCACCACCCAGCACTCGTCTAACTATCCTCCGCCGCCGCCTGCTGCTCCAGTTGCTTGGTCCACTGGCCTTTTTGACTGCTGCTCAGATGTCAAAAACTGTTGCATCACATGCTGGTGTCCATGTATAACTTTTGGCCAAATAGCCGAGATTGTAGACCGTGGATCTACGTCAAGTGTTACTAGTGGAACCCTGTACGGACTGATTAGTCTCATAACTGGCTGTGCATGCATCTATTCTTACGTCTATCGCACCAAGATAAGGGAACAATACATGTTGGAAGAGAGCCCTTGTGGGGACTGCATGGTCCATTGCTTCTGCGATAGCTGTGCAATGTGCCAAGAATACCGTGAGCTTCAAAACCGCGGATATAACATGACTTTAGGTTGGAAGGGCAACGTTCAGCAACAGAACCATGGGGTGGCAATGACTCCAACAGCTCCAACTTCTGAGCCAGGAATGACACGGTG 563 0.5044 MYPPNPDTSDQKHHGAPTPYTQLPATGVQVSSTTQHSSNYPPPPPAAPVAWSTGLFDCCSDVKNCCITCWCPCITFGQIAEIVDRGSTSSVTSGTLYGLISLITGCACIYSYVYRTKIREQYMLEESPCGDCMVHCFCDSCAMCQEYRELQNRGYNMTLGWKGNVQQQNHGVAMTPTAPTSEPGMTR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01528 187 Pfam PLAC8 family 51 149 IPR006461 -
Bva01g01528 187 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 50 152 IPR006461 -
Bva01g01528 187 PANTHER DUF614 FAMILY PROTEIN-RELATED 20 186 IPR006461 -
Bva01g01528 187 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 20 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01528 Bva-Chr1 16772455 16773801 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01528 - - qlo:115980805 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01528 01 16772455 16773801 Bva01g01528 01 16772455 16773801 ECH