Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01524 ATGGATGAGACTAGAAAGCCTTCAACTTCAATCTCCTCTTCTGACCTTACAGTGGAAGAAACAGGACCGCCTCATGAATCCTTGTTTCTCGTCTTAGCATACCTTCCTGTTTACGAGCTTCTAACAGTGTCTCAAGTCTGCAAATCTCTAAGAGATGCAGTGAACAAAGACATACTGCCATGGCTGAATCTCATTCTTGACAAGCCTCTGAATTCAAGACTCACCGATGAAATTCTCGTCGGAATTGCTTCCAAGGCAAAGGGTAGGCTTCAAACTCTGGCTCTCATCAACTGCGCCAAGATTACAGACCATGGATTTCTAAGGGTCATAGAAGAAAACCTTTTGATAGATAAGCTCTTTATACCAGAATGCACTGGCATATCCCCTGAAGGGATATTAAAAGCTGTGGAAATTCTGTGCCATGGAAATCACTGCCTCAGCAGCTTAAGGATAAATGGCATCTACAATCTAAGAAAGGAGCACCTTGACATGCTTGGCATTTACCTTAAGAACCATCTGCAATCTGAGGAACAGAAAAACCCGAAACCTATTTACTACCACCAACGTTGTAACTTGTTATCATTGAACCGCGAAGAAAATCCGTGGACGATCGATTTGGAAATCTGTCCCTTGTGTTGTGAGGTTAGAATGGTTTTTGATTGCCCCAAAGGGGCCTGCAAGCAACGTAGAGGATGCAAGTTTTGTATCCCAAGGTGTGAAAATTGTGGTGAATGCATTGAGTCTGATCAAATAGAAGAGACTGCCTGTGCAGATTTCTTGTGCTTGAAGTGTTGGCTACAGCTTCCCAAGTGCAATTTCTGTAACAAGCCATACTGCAAGCAACATAGAAATTGGCAGTGTAGTTCTACAGAGTCTGGATTTGTGTGCAAAGCTTGTGATGATAAACAATTTCTTGGGTATTTGGTTGGTGATGTTGAATGGTA 944 0.4248 MDETRKPSTSISSSDLTVEETGPPHESLFLVLAYLPVYELLTVSQVCKSLRDAVNKDILPWLNLILDKPLNSRLTDEILVGIASKAKGRLQTLALINCAKITDHGFLRVIEENLLIDKLFIPECTGISPEGILKAVEILCHGNHCLSSLRINGIYNLRKEHLDMLGIYLKNHLQSEEQKNPKPIYYHQRCNLLSLNREENPWTIDLEICPLCCEVRMVFDCPKGACKQRRGCKFCIPRCENCGECIESDQIEETACADFLCLKCWLQLPKCNFCNKPYCKQHRNWQCSSTESGFVCKACDDKQFLGYLVGDVEW 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01524 314 Gene3D Ribonuclease Inhibitor 62 175 IPR032675 -
Bva01g01524 314 ProSiteProfiles F-box domain profile. 17 64 IPR001810 GO:0005515
Bva01g01524 314 Pfam F-box-like 24 57 IPR001810 GO:0005515
Bva01g01524 314 PANTHER F-BOX PROTEIN SKIP28 13 303 - -
Bva01g01524 314 SUPERFAMILY F-box domain 24 59 IPR036047 GO:0005515
Bva01g01524 314 MobiDBLite consensus disorder prediction 1 22 - -
Bva01g01524 314 Gene3D - 22 59 - -
Bva01g01524 314 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 13 303 - -
Bva01g01524 314 SMART fbox_2 23 64 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01524 Bva-Chr1 16744170 16745769 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01524 - - lang:109340729 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01524 01 16744170 16745769 Bva01g01524 01 16744170 16745769 ECH