Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01523 ATGGCTTTTTTGCTGCTATTTCTCCTTCTAGCTGGTTATGTTTCTGCAGGTGAAGCTACAAGCCTGCAGGAGCTAGAGAATGCACAGAGAAATAGTGAAAGGATAGAGAGGTCAAAATGGGCAAGCCTATTGCATCCCAGCTCATCTGACAGTACCCTTGCAGTGACCTATTTCCATAAACAGTATGCTTTTATTGGTGTCAACATTGGTACAGATGTCTCTGACATGCCAACACCAGCACAGGTTGTTGCCCTTCTTAAGGCTCAGAATATCCAACATGTCAGACTCTACGATGCTGACCGAGCCATGCTCCTTGCACTTGCCAACACAGGCATCCGTGTAATTGTTTCTGTTCCCAACGACCAGCTCCTTGGCATTGGTCAGTCCAATGCCACTGCAGCCAACTGGGTTGCTCGCAATGTTGTAGCTCATGTCCCTGCAACCAACATAACTGCCATAGCTGTTGGATCCGAAGTCCTAACTACACTCCCAAATGCAGGTCCAGTCCTAGTTTCTGCCCTTAAATTCCTTCAATCAGCTCTTGTGGCTGCTAATCTGGATCAGCAAATTAAAGTCTCTACTCCACACTCTTCTTCTATCATCCTTGATTCCTTTCCACCTTCCCAAGCATTTTTTAATCGCACATGGAACCCAGTCATGGTCCCCTTGCTCAAATTTTTGCAGTCAACAGGCTCATATCTTATGCTCAATGTATATCCATACTATGATTACAGGCAATCCAATGGTATAATCCCACTGGATTATGCACTATTTCGGCCCCTTCCTCCAAATAAGGAAGCTGTTGATGCTAACACTCTCCTGCATTACACTAATGTCTTTGATGCTGTTGTTGATGCTGCTTATTTTGCAATGTCCTATTTGAACTTCACCAATATTCCAATTGTAGTGACTGAGTCAGGATGGCCCTCGAAAGGCGATTCATCTGATGAGCTAGATGCAACAATTGACAATGCAAACACTTACAACAGTAACTTGATCAGACATGTCTACAATAACACCGGGACTCCTAAACATCCGGGAGTCCCGGTTAGtacttatatttatgaacTATATAATGAAGACCTAAGATCAGGTCCTGTGTCTGAGAAGAACTGGGGGCTTTTTAATGCTGATGGATCACCAGTATATACCTTACACTTGTCCGGTGCGGGTACTGTGTTGGCaaatgacacaacaaaccaaaCCTTCTGTGTTGCAAAGAACAATGCTGACTCTAAGATGGTACAAGCAGCACTTGATTGGGCTTGTGGACCTGGCAAAGTGGATTGTTCACCATTGCTGCAGGGTCAACCGTGTTATGAACCAGATACTGTTGCTGGACATGCTACATATGCTTTCAATGCATATTACCAGTTGATGGGAAAGTCTCCTGGGACCTGTGATTTCAAAGGGGTTGCCACTGTCACCACCACAGACCCAAGTCATGCTTCCTGTATTTTTCCAGGAAGTGTTGATAGAAATGGGACCCGCACAAACCACACGTCACTGGCGCCATCGGCGAATTCTTCAACTTCAGGATGCTTTTCACAATACACCTACAATGGTGGATATTTCACAAGCTCTGTCATTTTAGGTTCTTTACTTCTGAGTTCAGTTTTCTTGTA 1625 0.4382 MAFLLLFLLLAGYVSAGEDAFIGVNIGTDVSDMPTPAQVVALLKAQNIQHVRLYDADRAMLLALANTGIRVIVSVPNDQLLGIGQSNATAANWVARNVVAHVPATNITAIAVGSEVLTTLPNAGPVLVSALKFLQSALVAANLDQQIKVSTPHSSSIILDSFPPSQAFFNRTWNPVMVPLLKFLQSTGSYLMLNVYPYYDYRQSNGIIPLDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDAAYFAMSYLNFTNIPIVVTESGWPSKGDSSDELDATIDNANTYNSNLIRHVYNNTGTPKHPGVPVSTYIYELYNEDLRSGPVSEKNWGLFNADGSPVYTLHLSGAGTVLANDTTNQTFCVAKNNADSKMVQAALDWACGPGKVDCSPLLQGQPCYEPDTVAGHATYAFNAYYQLMGKSPGTCDFKGVATVTTTDPSHASCIFPGSVDRNGTRTNHTSLAPSANSSTSGCFSQYTYNGGYFTSSVILGSLLLSSVFL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01523 498 Pfam Glycosyl hydrolases family 17 22 343 IPR000490 GO:0004553|GO:0005975
Bva01g01523 498 SUPERFAMILY (Trans)glycosidases 22 343 IPR017853 -
Bva01g01523 498 Gene3D Glycosidases 21 348 - -
Bva01g01523 498 Pfam X8 domain 360 431 IPR012946 -
Bva01g01523 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 256 269 IPR000490 GO:0004553|GO:0005975
Bva01g01523 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 4 489 IPR044965 GO:0004553|GO:0005975
Bva01g01523 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 4 489 - -
Bva01g01523 498 SMART X8_cls 359 444 IPR012946 -
Bva01g01523 498 Gene3D - 353 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01523 Bva-Chr1 16739690 16743951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01523 18 438 Glycoside Hydrolase AT2G01630 79.810 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01523 K19891 - cit:102622811 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01523 01 16739690 16743951 Bva01g01523 01 16739690 16743951 ECH