Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01512 ATGGGTTCTGAAGGATCCACGGTTGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGACGCTGATGATATATTCATGCAATCTTGGACAGGGACTATCATTGGTCCCCCTGGTACTGTCCATGAAGGGCGTATCTACCAGTTGAAATTGTTCTGTGGCAAGGACTATCCGGACAATCCGCCATCTGTTAGATTTCAAACAAGGATTAACATGACATGTGTGAACCAAGAATCTGGCTTGGTTGAGCCGCAACTATTTCCCATGCTTGCTAGTTGGCAACGGGAGTATACAATGGAAGACATATTGAtgcaattgaagaaagaaatgatgtCTCCCCAAAACCGGAAGCTAGCTCAGCCTCCTGAAGGCAACGAAGAAGGCAGGATTGATCAAAAGGGGCTGGTGCTGAAATGTTGTATTGTGTA 479 0.4322 MGSEGSTVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQESGLVEPQLFPMLASWQREYTMEDILMQLKKEMMSPQNRKLAQPPEGNEEGRIDQKGLVLKCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01512 159 Pfam Ubiquitin-conjugating enzyme 41 136 IPR000608 -
Bva01g01512 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 145 - -
Bva01g01512 159 SUPERFAMILY UBC-like 8 142 IPR016135 -
Bva01g01512 159 SMART ubc_7 14 158 - -
Bva01g01512 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Bva01g01512 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 145 - -
Bva01g01512 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01512 Bva-Chr1 16631111 16635128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01512 K10704 - tcc:18609862 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01512 01 16631111 16635128 Bva01g01512 01 16631111 16635128 ECH