Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01433 ATGGGGAAGTGGTCTGTGATTAGAAATTTGGGGAGTGTGAAAGTAAATGGCCCGCTTGCCATACTCACCTTCCCAATTCGAATTTCAGATCTTCGCGAGCTTGCGAAATCTGTTGGCCGGCCAATGGAGGAAGATAATGTCAAGAATGAGGAAGAGGAATTCAACACTGGACCACTATCTGTACTCATGATGAGTGTTAAGAATAATACTCAGGTGTTGATCAATTGTCGGAACAATAGAAAACTTCTGGGTCGCGTCAGGGCTTTTGATAGGCACTGCAACATGGTTCTTGAAAATGTCAGGGAGATGTGGACAGAGGTGCCAAAGACAggcaaaggaaagaagaaggcAAACCCAGTAAACAAGGATAGATTCATCAGCAAAATGTTTCTCCGCGGCGATTCTGTTATCATCGTTCTTAGGAACCCCAAAGGACGAGGTTg 443 0.4244 MGKWSVIRNLGSVKVNGPLAILTFPIRISDLRELAKSVGRPMEEDNVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVLRNPKGRG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01433 147 SMART Sm3 62 141 IPR001163 -
Bva01g01433 147 Pfam LSM domain 65 139 IPR001163 -
Bva01g01433 147 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 39 144 IPR027248 GO:0008380|GO:0030532
Bva01g01433 147 CDD Sm_D2 54 143 IPR027248 GO:0008380|GO:0030532
Bva01g01433 147 SUPERFAMILY Sm-like ribonucleoproteins 57 143 IPR010920 -
Bva01g01433 147 Gene3D - 52 146 - -
Bva01g01433 147 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 39 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01433 Bva-Chr1 15831359 15833855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01433 K11096 - cit:102610531 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01433 01 15831359 15833855 Bva01g01433 01 15831359 15833855 ECH