Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01183 ATGAGGAGCCTCCTTTCGAGCTCGAAACTCCTATTCACTACCACCAAGGGTTTTCTCGGCACCACCAAACAAATTGGGCAATGGGGTCGATCTTATAGCCTAATGCCAGGGGTGATAGAGCACTCTTGCAGAGGAGAGACGGCATACGACATCAATGGACCCATCATCGACGACACTGCCGGCGTTGTCGTTGGTCGGCTCCATTTCTTTGAGTGTGATAACCCTTCAAAGCCTGAGCCCTTCTATATGTACCCCCCTGGTGGCGCAGTTCCTGCAGGTCTGGCAATTAATGATACTATGGAGTACATTcgttttataaataaaacctgTTTGGGTCAAGCTGCGTCTATGGGTTCTCTCATACCGGTTGAAGACACCAACGGTGAGAGGCGCTCTTCCAAGTGCAACGACCATGACTCGTCTCAATTTGGGAGCAGGAAAGCACGCGCAATCTCGGCTCAACCATG 467 0.4946 MRSLLSSSKLLFTTTKGFLGTTKQIGQWGRSYSLMPGVIEHSCRGETAYDINGPIIDDTAGVVVGRLHFFECDNPSKPEPFYMYPPGGAVPAGLAINDTMEYIRFINKTCLGQAASMGSLIPVEDTNGERRSSKCNDHDSSQFGSRKARAISAQP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01183 155 MobiDBLite consensus disorder prediction 125 155 - -
Bva01g01183 155 PRINTS Clp protease catalytic subunit P signature 78 98 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva01g01183 155 PRINTS Clp protease catalytic subunit P signature 108 125 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva01g01183 155 Gene3D - 22 151 - -
Bva01g01183 155 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 133 - -
Bva01g01183 155 SUPERFAMILY ClpP/crotonase 50 122 IPR029045 -
Bva01g01183 155 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 133 IPR023562 -
Bva01g01183 155 Pfam Clp protease 51 132 IPR023562 -
Bva01g01183 155 MobiDBLite consensus disorder prediction 127 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01183 Bva-Chr1 10800785 10802393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01183 K01358 - oeu:111395418 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01183 01 10800785 10802393 Bva01g01183 01 10800785 10802393 ECH