Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01067 ATGGGTTCTGAGGTtgaacagaaagaaaatccGAGAAAGTGCGAGAAAACTGTAAACGGCAAGATTCCTGATACAGAATCATACCCTTCTCATCAAAGCCTTCCGGATATGGAAGATATCACAGATGCGATAACGAAGAAGGAAAACGCAGCAGAAAAGGAAGATCAAAACGACACCCACGCATCACCGTCGCCGTCGTCGTCACCCAGAAAATCGGGTGAGGATCACGCCAGCCGAGCTCTTGATTATAACAACGAAGatggtaaaattattaatacgTATCTGAGAACGAATTCCTATGGCCAAGAACGTGTTCTTCAACCCCATTCACAGCTCCCGAAACCAGAGATACCTCCGGGTATACTACAGAAAGCTCCACCACCGAGAAACGACGACGTTTCATCCCTTGATATGCCGGCCATCGGGAAATTAATTCGCGAGAAGAGCAACGGCTGGTCATCGGCAATTTTGAAGAGGCTGTCATCGCTGAAGGATTCGGGTCCGGGTTCGGATCCGGATACTACCCCGAACCGGAATAGGGTGACGGAGTTCAGTCTATCGGGTCTCAAAGTCGTGGTGAAGCTTAAGAACGAAGAAGTCGAAGAAGAGCAGCGCTTCACCATGAAAGGGCGAATCAGCTTCTTCTCTCGCTCTAATTGCAGGGACTGCACGGCAGTGAGGAGATtcttgagagagagagggttGAAGTTCGTGGAGATCAACGTTGACGTGTTCccggagagagagaaagagctCATAGACCGGACCGGGAGCTCTACGGTGCCGCAGGTATTCTTCAACGAGAAGCTGTTTGGGGGATTGGTGGCTTTGAACTCGCTGAGGAACAGTGGCATGCTTGAGCAGAGGCTGAGAGACGCGCTGAGCGTCAGTTGTCCTGCTCACGCGCCGGCACCACCGGTTTACGGTTTTGACAATCTCGAGGAGGAGGATCCGACAGATGAGCTGGTGCCGATAGTGAGGTTTCTACGGCAGAGATTGCCCATCCAGGACCGtctgatgaagatgaagatcaTCAAGAATTGCTTCTCCGGCACAGAGCTGGTGGATTCGCTTGTTCAACAGTTGGACTTGGGTAAAGATTTCACCCGATTCAAGGCTATCGAGATTGGAAAGCATTTATTGAAGAGGCATTTCATCAACCATGTTTTCGGGGAAAATGATCTTCTGGACGGAGACCACTTTTATCGTTTTCTTGAGCACGAACCTTTTATCCCTAAATGCTTTAATTTTCATACCGCCACAAATGATAGTAAACCAAAGCCTGCAGTTGCAATTTGCCAACGGCTTACCAAGATTATGTCTGCCATTCTAGAGTCTTATGCTTCTGATGACAGGCAACATGTTGATTATGCAGCCATTAGCAAAAGTGAAGAATTTCGCAGGTATGTAAATATGACTCAGGATCTTCAGCGGGTGAACCTCATAGAACTATCAGAAAACGAAAAACTTGCCTTCTTCATAAATTTGTATAATGCCATGGTCATCCATGCCATTATTAGAATAGGATGTCCAGAAGGTGTAATTGACAGAAGGTCCTTCTACTCTAATTTCATGTATGTGGTGGGAGGGGATCCTTATTCTCtcaataacattaaaaatggTATCCTCCGAAGCAACCGGAGATCACCATATTCCTTAATGAAGCCCTTTGCTGCAGGAGACAGACGGTTAGAGGTTGCTGTCATTAAAGTGAATCCATTAATTCACTTTGGACTTTGCAATGGCACAAAGTCAAGCCCAAAGGTgagattgttttcttttcaaggaGTAGAAGATGAATTAAGATGTGCTGCTAGAGAATTCTTCGAAAATGGAGGAGTGGAAATTGACCTGGAGAAGAGAACTGTGTATCTTACTCGAATGATCAAATGGTTCAATGGGGATTTTGgacaagagagagaaatactGAAGTGGCTAATTAATTACGTGGATGCAAATAAGGCCGGTCTTCTGACACATCTCCTAGGTGATAGTGGCCCTGTTAGTATCTCATATCAGAATTTTGATTCGTCTATAAATTCTTG 2045 0.4289 MGSEVEQKENPRKCEKTVNGKIPDTESYPSHQSLPDMEDITDAITKKENAAEKEDQNDTHASPSPSSSPRKSGEDHASRALDYNNEDGKIINTYLRTNSYGQERVLQPHSQLPKPEIPPGILQKAPPPRNDDVSSLDMPAIGKLIREKSNGWSSAILKRLSSLKDSGPGSDPDTTPNRNRVTEFSLSGLKVVVKLKNEEVEEEQRFTMKGRISFFSRSNCRDCTAVRRFLRERGLKFVEINVDVFPEREKELIDRTGSSTVPQVFFNEKLFGGLVALNSLRNSGMLEQRLRDALSVSCPAHAPAPPVYGFDNLEEEDPTDELVPIVRFLRQRLPIQDRLMKMKIIKNCFSGTELVDSLVQQLDLGKDFTRFKAIEIGKHLLKRHFINHVFGENDLLDGDHFYRFLEHEPFIPKCFNFHTATNDSKPKPAVAICQRLTKIMSAILESYASDDRQHVDYAAISKSEEFRRYVNMTQDLQRVNLIELSENEKLAFFINLYNAMVIHAIIRIGCPEGVIDRRSFYSNFMYVVGGDPYSLNNIKNGILRSNRRSPYSLMKPFAAGDRRLEVAVIKVNPLIHFGLCNGTKSSPKVRLFSFQGVEDELRCAAREFFENGGVEIDLEKRTVYLTRMIKWFNGDFGQEREILKWLINYVDANKAGLLTHLLGDSGPVSISYQNFDSSINS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01067 681 Coils Coil 37 57 - -
Bva01g01067 681 MobiDBLite consensus disorder prediction 1 20 - -
Bva01g01067 681 CDD DEP 329 403 - -
Bva01g01067 681 PANTHER F26K24.21 PROTEIN 50 681 - -
Bva01g01067 681 SUPERFAMILY Thioredoxin-like 202 292 IPR036249 -
Bva01g01067 681 CDD GRX_DEP 210 282 - -
Bva01g01067 681 SUPERFAMILY "Winged helix" DNA-binding domain 320 417 IPR036390 -
Bva01g01067 681 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 333 404 IPR000591 GO:0035556
Bva01g01067 681 Gene3D Glutaredoxin 207 294 - -
Bva01g01067 681 MobiDBLite consensus disorder prediction 40 59 - -
Bva01g01067 681 Gene3D - 322 461 IPR036388 -
Bva01g01067 681 ProSiteProfiles Glutaredoxin domain profile. 200 297 - -
Bva01g01067 681 Pfam Glutaredoxin 214 270 IPR002109 -
Bva01g01067 681 ProSiteProfiles DEP domain profile. 329 406 IPR000591 GO:0035556
Bva01g01067 681 MobiDBLite consensus disorder prediction 167 181 - -
Bva01g01067 681 Pfam Protein of unknown function, DUF547 483 608 IPR006869 -
Bva01g01067 681 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 50 681 - -
Bva01g01067 681 MobiDBLite consensus disorder prediction 1 86 - -
Bva01g01067 681 MobiDBLite consensus disorder prediction 162 181 - -
Bva01g01067 681 MobiDBLite consensus disorder prediction 110 134 - -
Bva01g01067 681 SMART DEP_3 329 406 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01067 Bva-Chr1 8512724 8518574 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01067 - - pper:18791582 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01067 01 8512724 8518574 Bva01g01067 01 8512724 8518574 ECH