Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01011 ATGCCGAAGCTCTGTGACTTGCAAGTACACGTTAATGGTCAGCAAATATTCGTTTTAAAAGAGAAAGTTGTATCAAAATACTGTGGAAGTTTGAAGAAAATCGTGAATCAACACAAGAGAAAAAGCCAGATAAAGAACTTGGACATTGAAATCAATGATTTTCCTGGTGGCCCAGATGGGTTTGAACTGGTTTCAAGATTCTGTTACAACAATGGCAAAATCCCAATAACCCCATCTAATGTGCCTCTCCTCCATTGCTGCGCTGTTTACCTGGGAATGACAGAGGAAGTATTTAGCAACAATCTATTGCAGCAAACAGAAACTTTTCTTGAGGGAATCTATTACTGGGAATGGCACGAGTTAATATCGAGTCTCAAGAGTTGCGAGCTGTTTTATTCATGTGCAGATTCCTGTGGCCTCTTAGAGAAACTCATTTTTGCACTCTTGGCAAAGCTTGCTCAAAATTCAGACATAAACCTCATAGCCACAATGACGACATCGTCCTCGTCTTCGTCTTCTCCAGAAGCCAATTCTGTTAACAGATTCTTCTCTCCCTCAGCCAAAACCACCCCAGAAATAACCAAATCACCCTTTCCAAGCAGCAGCAGAGCCTGGTGGTATGATGATTTGACCATTTTGCCCCCGCTCATCATTGAGAAACTTCTTCAGACATTGGGCGTACAGAGCAGATA 692 0.4205 MPKLCDLQVHVNGQQIFVLKEKVVSKYCGSLKKIVNQHKRKSQIKNLDIEINDFPGGPDGFELVSRFCYNNGKIPITPSNVPLLHCCAVYLGMTEEVFSNNLLQQTETFLEGIYYWEWHELISSLKSCELFYSCADSCGLLEKLIFALLAKLAQNSDINLIATMTTSSSSSSSPEANSVNRFFSPSAKTTPEITKSPFPSSSRAWWYDDLTILPPLIIEKLLQTLGVQSR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01011 230 PANTHER OS12G0117600 PROTEIN 2 227 IPR043454 -
Bva01g01011 230 SUPERFAMILY POZ domain 3 95 IPR011333 -
Bva01g01011 230 Gene3D Potassium Channel Kv1.1; Chain A 1 112 IPR011333 -
Bva01g01011 230 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01011 Bva-Chr1 7872882 7874261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01011 6 225 EF-hand Containing Proteins AT3G44820 28.829 1.88e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01011 - - gmx:100808259 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01011 01 7872882 7874261 Bva01g01011 01 7872882 7874261 ECH