Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00990 atggcttCGGCATCCTCCAAAACCCTAACGGATTTCTTTCAACCAGCTTCCAAGCGATTGAAACCCTCTATCACTCCAATCTGCAAAGTGTCAACGTCTCAGTCCCACAACGATTCTGATGATGCTGCATCCGCCCCCAACAATGGCTCCCCTCACTCATCTATTCTCAACGTCGAGCAGAAGTCACGCGTTGAGTACAACAAATCGCTGGCCAAATCTAAGAGGAATCTCAAAATCTGCACCGAAAAGGTCTCTAATTGTAAAGGAGGTGGTGGTTATGTGAAACTAGAGGAATTGCTGGTGGAGGGGACATGGTTGGAAGCTCTCCCAGGGGAATTTCAGAAACCCTATGCCCAAAATCTCTGCAAGTTTGTGGAAAGAGAGATATACAGCGGAACTGACACCATTTATCCACCTTTGCACTTGATTTTCAATGCCCTTAACTCTACCCCTTTTGATAGGGTTAAAGCAGTTATCCTTGGACAGgaCCCTTATCATGGACCTGGTCAAGCTATGGGCCTCTCATTCTCTGTGCCTAATGGAGTGAAAGTCCCTTCAAGtcttgtaaatatatttaaggaACTTAAGCAAGACCTTGGCTGTTCAGTTCCATCTCATGGAAATCTAGAAAAGTGGGCTGTGCAGGGTATTCTCCTGCTCAATGCTGTTTTAACAGTCAGGAAGCATCAAGCTAATTCTCATGCCAAAAAAGGATGGGAACAATTTACTGATGCCGTTATCAAGACAATCTCACAAAAGAAGGAAGGAGTTGTATTTCTATTGTGGGGAAACTCTGCTCAAGAGAAATCTAGGTTGATTGATGCAACAAAGCATCATATTCTTAAAGCTGCACATCCTTCTGGTCTGTCAGCAAACAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACAAACCAGCTTTTGGAGCAAATGGGAATTCCCCCCATTGATTGGCAGCTATA 962 0.4387 MASASSKTLTDFFQPASKRLKPSITPICKVSTSQSHNDSDDAASAPNNGSPHSSILNVEQKSRVEYNKSLAKSKRNLKICTEKVSNCKGGGGYVKLEELLVEGTWLEALPGEFQKPYAQNLCKFVEREIYSGTDTIYPPLHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPNGVKVPSSLVNIFKELKQDLGCSVPSHGNLEKWAVQGILLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGNSAQEKSRLIDATKHHILKAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIPPIDWQL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00990 320 ProSitePatterns Uracil-DNA glycosylase signature. 156 165 IPR018085 GO:0006281|GO:0016799
Bva01g00990 320 CDD UDG-F1-like 117 318 IPR002043 GO:0004844|GO:0006281|GO:0006284
Bva01g00990 320 Pfam Uracil DNA glycosylase superfamily 153 307 IPR005122 -
Bva01g00990 320 SUPERFAMILY Uracil-DNA glycosylase-like 100 320 IPR036895 -
Bva01g00990 320 MobiDBLite consensus disorder prediction 30 57 - -
Bva01g00990 320 Hamap Uracil-DNA glycosylase [ung]. 102 319 IPR002043 GO:0004844|GO:0006281|GO:0006284
Bva01g00990 320 SMART UDG_2 148 308 IPR005122 -
Bva01g00990 320 SMART UDG_2_a 148 308 - -
Bva01g00990 320 TIGRFAM ung: uracil-DNA glycosylase 104 312 IPR002043 GO:0004844|GO:0006281|GO:0006284
Bva01g00990 320 PANTHER URACIL-DNA GLYCOSYLASE 5 320 IPR002043 GO:0004844|GO:0006281|GO:0006284
Bva01g00990 320 Gene3D - 88 320 IPR036895 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00990 K03648 - gmx:100818241 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00990 01 7685441 7695212 Bva01g00990 01 7685441 7695212 ECH