Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00842 ATGACGTTGAAGAGGGGGTTGTCTTCTGCGGGGGTTAGCAAGAGTAGAAGCAAGGGATCTCATTTTCCTGTTCTCggtttcattttcctttgcgTTATATCGCccttgctttttttctttgccagAGGGCTCCACACTGCAGATCAAGATGACATTTCAAATGCTCCAAGCAAAAAGGAATGGAGAGAATGGCAAGCATTACAGGAactcaaatctcttttctcaaAAGAGGTTATTGATGTTATTTTGGCTAGCACAAATGATTTGGGGCCTTTGAGTCTTgacaatttcataaaaaacaaCTTGTCAGCTTCATGGAGAGTTGTTGAGGCAGAGACTTCAAAGGCTACGCCTGAGctaaACCAACTAACAGCatttaaacaagaaaagtCAAAGGAGAAAGATGGAGGATTTTCAGATGATCGAGCTCAATTGGATGATAACCCTGCCCATCTAGCCAGAAGGcAATTGATACAAAAAAGGCGTGAAAAGCGTGCTGCTGAGTTGGTGAGACAGGATGACGATGTATATGTAAAACTTGAAAATGCAGCTATTGAACGCTCCAAATCAGTTGATTCTGCAGTTTTGGGTAAATATAGCATTTGGAGGAAAGAaattgagaatgaaaattCTGACTCCACCATACGGTTGATGCGGGACCAGATCATCATGGCTAGGGTGTATTTGAGCATTGCAAAGATGAAGAATAAGCTTGAGCTGTACCAAGAACTGCAAACACGGCTTAGAGAGAGTCATCGTGCTTTAGGTGATGCGTCTTCTGATGCTGAGCTGACTCACAGTGCACACGAGAAAATTAAGGCCATGGGCCAAGTTCTATCAAAAGCAAAGGAGCAATTGTATGACTGCAAGCTGGTGACTGGGAAGTTGAGGGCAATGCTACAAACAGCTGATGATCAAGTTAGGGGCCTGAAAAAGCAGAGCACATTCCTCAGTCAATTGGCTGCCAAGACCATTCCAAATGGAATTCACTGCTTGTCTATGAGATTAACCATAGATTACTACCTCCTTCCTccagaaaagagaaagtttcCTAAGAGTGAGAACTTGGAGAATCCTAATCTATTTCATTATGCTCTCTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAGCTGTTGTGAATGCTAAGGATCCTTCAAAGCATGTTTTTCACCTTGTCACTGATAAACTTAATTTTGGAGCCATGAACATGTGGTTTCTGTTGAATCCTCCAGGCAAAGCTACAATTCATGTTGAAAATGTTGATGAATTTAAGTGGTTGAATTCTTCATATTGTCCAGTCTTGCGGCAGCTTGAATCTGCTACAATGAAAGAGTATTATTTCAAGGCTGGCCATCCAACGACACTTTCTTCTGGTGCTTCTAATCTGAAATACAGAAACCCGAAGTACCTCTCAATGCTCAATCATCTGAGATTCTACCTTCCACAAGTTTATCCAAAATTGGATAAGATCCTCTTTCTTGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTGTGGGCTGTGGATCTTCATGGGAAAGTAAATGGTGCAGTAGAAACATGTGGTGAGAGCTTTCACCGATTTGACAAGTATCTTAACTTCTCTAATCCTCATATTGCAAGAAACTTTGATCCCAGTGCTTGTGGTTGGGCATATGGTATGAACATTTTTGATCTGAAGGAATGGAAAAAGAAGGATATTACTGGCATATATCACAAGTGGCAGAATATGaatgaagaaaggaCGCTTTGGAAGCTGGGGACACTACCTCCAGGGCTAATTACATTCTATAAACTCACACATCCGttaaataaatcatggcaTGTTCTTGGTCTGGGGTACAATCCAAGTGTAGATCGATCAAATATTGAGAATGCAGCAGTTGTACACTACAATGGCAATATGAAGCCATGGTTAGAGATTGCAATGACAAAATACCGGTCTTACTGGACCAAATACGTGAAGTACGATCATCCCTATCTCCGGAATTGTAAGCTAAGTGAATG 2021 0.3864 MTLKRGLSSAGVSKSRSKGSHFPVLGFIFLCVISPLLFFFARGLHTADQDDISNAPSKKEWREWQALQELKSLFSKEVIDVILASTNDLGPLSLDNFIKNNLSASWRVVEAETSKATPELNQLTAFKQEKSKEKDGGFSDDRAQLDDNPAHLARRQLIQKRREKRAAELVRQDDDVYVKLENAAIERSKSVDSAVLGKYSIWRKEIENENSDSTIRLMRDQIIMARVYLSIAKMKNKLELYQELQTRLRESHRALGDASSDAELTHSAHEKIKAMGQVLSKAKEQLYDCKLVTGKLRAMLQTADDQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPKSENLENPNLFHYALFSDNVLAASVVVNSAVVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPSACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEERTLWKLGTLPPGLITFYKLTHPLNKSWHVLGLGYNPSVDRSNIENAAVVHYNGNMKPWLEIAMTKYRSYWTKYVKYDHPYLRNCKLSE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00842 673 PANTHER HEXOSYLTRANSFERASE 15 673 - -
Bva01g00842 673 SUPERFAMILY Nucleotide-diphospho-sugar transferases 363 670 IPR029044 -
Bva01g00842 673 Pfam Glycosyl transferase family 8 331 647 IPR002495 GO:0016757
Bva01g00842 673 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 15 673 IPR029993 GO:0047262
Bva01g00842 673 Coils Coil 231 251 - -
Bva01g00842 673 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 364 666 IPR029044 -
Bva01g00842 673 CDD GT8_like_1 362 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00842 Bva-Chr1 6030644 6036167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00842 1 673 Glycosyltransferase AT3G61130 75.000 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00842 K13648 - gmx:100798073 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00842 01 6030644 6036167 Bva02g01780 02 19969860 19975895 BWGD