Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00634 ATGAATCCAGAGTATGATTATTTGTTCAAGCTTCTCCTTATTGGAGATTCTGGTGTTGGCAAGTCATGTCTACTTCTAAGATTTGCTGATGATTCATACATCGAGAGCTACATTAGCACCATTGGAGTTGATTTTAAAATACGAACTGTGGAGCAGGATGGAAAGACCATTAAACTTCAGATTTGGGACACAGCCGGACAAGAACGATTTAGAACGATCACCAGCAGCTACTATCGTGGGGCACATGGGATCATTATTGTTTATGATGTGACAGACCAGGAGAGCTTCAACAATGTGAAGCAGTGGCTGAGCGAAATTGACCGCTATGCCAGCGATAGCGTGAACAAACTTTTGGTTGGAAACAAGTGTGATCTTACAGCAAATAAAGTTGTCTCATATGAAACAGCTAAAGCATTTGCAGATGAAATAGGCATACCTTTCATGGAAACAAGTGCAAAAGATGCTACAAATGTGGAACAAGCATTCATGGCCATGGCTGCATCAATCAAGAATAGAATGGCAAGCCAACCAGCTGGGAGTAACACAAGGCCTCCAACGGTGCAGATTAGAGGACAGCCTGTTGCACAAAAAAGTGGCTGCTGCTCTTCTTA 611 0.4255 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASDSVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQPAGSNTRPPTVQIRGQPVAQKSGCCSS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00634 203 SMART ran_sub_2 14 202 - -
Bva01g00634 203 ProSiteProfiles small GTPase Arf family profile. 2 169 - -
Bva01g00634 203 SMART rho_sub_3 11 171 IPR001806 GO:0003924|GO:0005525
Bva01g00634 203 SMART arf_sub_2 1 177 - -
Bva01g00634 203 Pfam Ras family 10 170 IPR001806 GO:0003924|GO:0005525
Bva01g00634 203 ProSiteProfiles small GTPase Rab1 family profile. 4 203 - -
Bva01g00634 203 MobiDBLite consensus disorder prediction 173 203 - -
Bva01g00634 203 TIGRFAM small_GTP: small GTP-binding protein domain 7 163 IPR005225 GO:0005525
Bva01g00634 203 SMART ras_sub_4 6 172 - -
Bva01g00634 203 CDD Rab1_Ypt1 7 172 - -
Bva01g00634 203 PANTHER RAS-RELATED PROTEIN RABD2A-LIKE 6 202 - -
Bva01g00634 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 191 IPR027417 -
Bva01g00634 203 PANTHER LD21953P-RELATED 6 202 - -
Bva01g00634 203 PRINTS Transforming protein P21 ras signature 112 125 - -
Bva01g00634 203 PRINTS Transforming protein P21 ras signature 9 30 - -
Bva01g00634 203 PRINTS Transforming protein P21 ras signature 32 48 - -
Bva01g00634 203 PRINTS Transforming protein P21 ras signature 50 72 - -
Bva01g00634 203 PRINTS Transforming protein P21 ras signature 147 169 - -
Bva01g00634 203 ProSiteProfiles small GTPase Rho family profile. 2 174 - -
Bva01g00634 203 ProSiteProfiles small GTPase Ras family profile. 1 203 IPR001806 GO:0003924|GO:0005525
Bva01g00634 203 Gene3D - 2 201 IPR027417 -
Bva01g00634 203 SMART rab_sub_5 9 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00634 Bva-Chr1 4665997 4669009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00634 K07874 - cit:102624523 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01554 02 18462042 18465139 Bva01g00634 01 4665997 4669009 BWGD
Bva01g00634 01 4665997 4669009 Bva01g00634 01 4665997 4669009 ECH