Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00555 ATGGAGAGTGtcattgagaaaaatgaaggtaCTGAAGGGatagaagaaagggaaaatggTGGCAAAGTTGCTAGATTTGATGATTTGATTGAAGAAAAGGGTCGTGAGAGCAGCTCAAGCTCAGATTTTCTGTCATCTGAGGCGAATGGGCATGAAGAGCAGAGTCAAAGTAGCACTGAGGAGTCATCCTCGCCACCTTCAGTAGGATGGTCAGTTCAGGAAACTGCCGCAGTAGATTGTAGCAGCCCCAATGGAAGTGAGGGTAGTGAAAAATCACCCTTGAATAATGAGAAATTTCAGAAGAAAGTCTCAGTAGTACCAGAAATTGAAATGATGAAGGAAAGGTTTGCAAAATTGCTGCTTGGTGAAGACATGTCAGGCGGCGGAAATGGGGTGTCTACAGCATTGGCTATATCAAATGCCATAACTAATCTATGTGCTACACTCTTTGGGCAAATTTGGAGATTAGAACCTCTACCTAAGGAGAAGAAAGCAATGTGGCGAAGAGAGATGGAATGGCTTCTCTCTGTTAGTGATCATATTGTCGAATTGGTACCCATATGGCAAACTTTTCCAGATGGAAGCAAGCTTGAGGTCATGACTTGTAGACCCCGCTCGGATCTTTATGTCAATCTGCCAGCACTACGTAAATTAGATAACATGCTTCTTGAAATACTAGATGGTTTTGTTGATACAGAGTTTTGGTATATAGACCAAGGGGTTCTAGCCCCAGAAGCTGATGGTTCAACTTCTTTTCGAAGAGCACTTCAACGTCAAGAGGAAAAATGGTGGCTTCCCGTACCCCGTGTCCCTACTTGTGGCCTCCATGAAAATTCAAGAAAGCAGTTGCAGCACAAGCGCGACTGCACAAACCAAATATTAAAGGCTGTAATGGCTATTAACAGTATTACCTTAGCAGACATAGACATTCCTGAGTCATATTTGGAGTCTCTCCCAAAGAATGCACGAGCCAGTTTGGGGGATTTTCTTTACCGGTATATTTCATCAGATCAATTTTCACCTGAGTGTCTGCTGGAATGCCTTGATTTGTCATCTGAACATCAAGCTATAGAGATTGCCAATCGCGTGGAggcttccattttcatttggcGTAAGAAGACAACCTCAAAACCTGTCAATAGTACAACCAGATCAAGTTCAAGATCATCATGGGAAATGGTCAGGGATTTCATGGTTGATGGAGACAAAAGGGAATTGCTTGCTGAGAGAGCTGAAAGCCTTCTGCTATCCTTGAAGCAGCATTTCCCCGGTCTCCCTCAAACAGCGTTAGATATGAGCAAAATCCAATACAACAAGGATGTCGGGAAATCCATTCTAGAGAGCTACTCTAGAGTACTTGAGAGTCTGGCTTTTAACATCGTAGCCCGCATTGATGATGTGCTCTATGTGGATGACATGACAAAGCATTCTGATATTTCATCTTTCTCAAAAATTAGTGGAATTCCTCGCAAGAGCATGTCAGTTTCACACTCAGTTCCCTTCCCAAGCACTCCATATAAAACAGCTTTCGCCACGCCAAGCTTTAGCCCTGCAAGGGGAGATAAATCCCCATTCATCACTAGCAGCCAGCGTGGGGTGGGGATGAAGAAAGTTTTGACAGAGTTTCTTAGCATTGACACAAAAGGGAAGGCATATAGCAGTCCAAGTGAGAAATTAGCACCAAAACCAGTGGCATTCGAAGAAGTGCTGGCATTGGAAACAGATGTGGAGTCTAGTGACTGCACAGAAGAAGCTGCTAGCCCCAAGATAAGGAGCCAGGCATGGGAAGagta 1793 0.4255 MESVIEKNEGTEGIEERENGGKVARFDDLIEEKGRESSSSSDFLSSEANGHEEQSQSSTEESSSPPSVGWSVQETAAVDCSSPNGSEGSEKSPLNNEKFQKKVSVVPEIEMMKERFAKLLLGEDMSGGGNGVSTALAISNAITNLCATLFGQIWRLEPLPKEKKAMWRREMEWLLSVSDHIVELVPIWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDGFVDTEFWYIDQGVLAPEADGSTSFRRALQRQEEKWWLPVPRVPTCGLHENSRKQLQHKRDCTNQILKAVMAINSITLADIDIPESYLESLPKNARASLGDFLYRYISSDQFSPECLLECLDLSSEHQAIEIANRVEASIFIWRKKTTSKPVNSTTRSSSRSSWEMVRDFMVDGDKRELLAERAESLLLSLKQHFPGLPQTALDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDVLYVDDMTKHSDISSFSKISGIPRKSMSVSHSVPFPSTPYKTAFATPSFSPARGDKSPFITSSQRGVGMKKVLTEFLSIDTKGKAYSSPSEKLAPKPVAFEEVLALETDVESSDCTEEAASPKIRSQAWEE 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00555 597 MobiDBLite consensus disorder prediction 1 99 - -
Bva01g00555 597 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 4 520 IPR038937 GO:0005085
Bva01g00555 597 MobiDBLite consensus disorder prediction 575 597 - -
Bva01g00555 597 ProSiteProfiles PRONE domain profile. 99 481 IPR005512 GO:0005085
Bva01g00555 597 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 108 475 IPR005512 GO:0005085
Bva01g00555 597 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 4 520 - -
Bva01g00555 597 Gene3D PRONE domain, subdomain 1 100 339 - -
Bva01g00555 597 Gene3D PRONE domain, subdomain 1 340 481 - -
Bva01g00555 597 MobiDBLite consensus disorder prediction 1 38 - -
Bva01g00555 597 MobiDBLite consensus disorder prediction 39 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00555 Bva-Chr1 4229958 4233357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00555 - - gmx:100800673 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00555 01 4229958 4233357 Bva02g01450 02 17835047 17837937 BWGD
Bva01g00555 01 4229958 4233357 Bva01g00555 01 4229958 4233357 ECH