Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00550 ATGGAGAAGAGAATGGAAGTGGAACCAGGAGAAGTTGATGAAACGAAGTGGGTTTATGATTCTTCTGTGGATCATAAAGGCAGGATTCCTCTCCGAGCTTCCACTGGTTCTTGGAAAGCTTCCTTCTTCATTATTGCAATTGAGTTCAGCGAGAGGATGAATTACTTTGGAATTGCCACAAGCTTGGTTCTTTACCTCACCAGAGTAATGCACCAAGACCTCAAGACAGCAGCAAAAAATGTAAACTACTGGTCTGGTGTCACCACACTGATGCCACTCTTCGGAGGGTTCTTAGCTGATGCCTACTTGGGCAGATACAAAACAGTATTAGCATCAACCATATTTTATCTCATGGGTCTGGTTCTTCTTACCTTGTCCTGGTTCCTGCCAAAGTTAAAGCCATGTGACACTAGCATATGCACTGAACCAAGGAAGGCTCATGAATTGGCTTACTTCCTTGCCATTTACTTAATTTCAATAGGAACTGGAGGGCATAAACCTTCGTTGCAGAGCTTTGGGGCTGATCAATTTGACGATGATCACTCAGAAGAGAGAAGGCAGAAGATGTCCTTCTTCAATTGGTGGAGTATTGGCCTCTGCAGTGGACTCATTCTAGGGGTGACAGTAATTGTTTATGTGCAAGATAACGTTAGTTGGGGAGTTGCTGATATTATCCTCACCGCGGTCATGGCTTTCTCATTGCTCATCTTCATAATAGGAAGGCCATTTTATCGTTACAGGTCACCTTTAGGGAGCCCCTTGACTCCAATGTTGCAAGTTCTGGTTGCTGCAATATCCAAAAGAAAACTTCCATATCCTTCCAATCCTGCTGCTCAATTGTATGAAGTTCCAAAATCCCAGATTACCAATGGAAGGCTTTTATACCACACTGACAAACTTAAATTTCTAAATAAGGCGGCAATTCTTGTGGGGGATGAAAATTTAGCTGAGAAGGAGAATCCATGGAAAGTTGCAACTGTAACAAAGGTTGAAGAAATGAAGCTGATCATCAACATGATCCCCATTTGGAATGTGGAGAGGAGGAGTGGAGTGGCTGACTCCCCTGAAGACACAAGTGATGATGGTAGAGCCAAGGCAATGGTTTA 1106 0.4331 MEKRMEVEPGEVDETKWVYDSSVDHKGRIPLRASTGSWKASFFIIAIEFSERMNYFGIATSLVLYLTRVMHQDLKTAAKNVNYWSGVTTLMPLFGGFLADAYLGRYKTVLASTIFYLMGLVLLTLSWFLPKLKPCDTSICTEPRKAHELAYFLAIYLISIGTGGHKPSLQSFGADQFDDDHSEERRQKMSFFNWWSIGLCSGLILGVTVIVYVQDNVSWGVADIILTAVMAFSLLIFIIGRPFYRYRSPLGSPLTPMLQVLVAAISKRKLPYPSNPAAQLYEVPKSQITNGRLLYHTDKLKFLNKAAILVGDENLAEKENPWKVATVTKVEEMKLIINMIPIWNVERRSGVADSPEDTSDDGRAKAMV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00550 368 SUPERFAMILY MFS general substrate transporter 31 247 IPR036259 -
Bva01g00550 368 Gene3D MFS general substrate transporter like domains 10 345 IPR036259 -
Bva01g00550 368 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 350 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva01g00550 368 Pfam POT family 106 343 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva01g00550 368 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 95 119 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bva01g00550 368 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 20 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00550 Bva-Chr1 4198627 4202461 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00550 2 358 Organic Solute Cotransporters AT3G53960 63.712 5.70e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00550 - - gmx:100801757 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00550 01 4198627 4202461 Bva02g01444 02 17786265 17790873 BWGD