Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00184 ATGTGCACTGGTACTGAATCTCAAGGAATTATAAATGGTGATGACAACCCTTTAGCTTCAAAGGCAGGCCATGAAGACAGAATGAGAGCCAGAGATGATGGTGATGATGGCATTGAAGAAGGAACCACTACTTCTAATAACACCATTTCAAGATTCATTCATGCCCTTTTGAATCACCTGCATCATCTCCTTCCAGCTCTTTCTCTCTCCGAGGTGAAAGAAGAGTTAAAATCAATGGCAAAGATAGCATGCCCCATCATGATGACTGGCTTGTTATTATACTCTCGTCAAGACCCAGAAGTCACTAGGATTGCCCAAGTCTACATTGTTTTCTCAATCCCAGAACTTTTTGCTCAAGCCACTCTTAACCCATTGAGGACATTTCTTAGGACCCAAGGCTTAACCACCCCACTTACAATTGCTGCTTCCTTTTCCGCAGTTGCCCATCTTCCCATTAACTATTTCCTTGCCACATATTTGAGATTAGGTGTTAAGGGCATTGCTTTAGCCACTGGCCTCAATTCCATTAACATGATTCTGGGTTTGGTTTTCTACCTTCGATTCTCCGATAAGGCGCTGAAGCCATGGGAAGAAGCTTCATTTCTCACAGCATTTCAAGGGTGGAAGCCATTGCTGAGCTTGGCATTGCCGAGTTGCGTTTCGGTGTGCTTGGAATGGTGGTGGTATGAGATAATGCTATTCCTCTGTGGCTTGTTAAGTGATCCACAAACCACAGTGGCAACCATGGGAATCCTTATTCAAACAACTGGGTTTCTCTATGTGTTCCCATTTGCTTTGAGTGCAGCTTTAACCACAAGAGTTGGCCATTCTTTGGGTGCTGGGCAAGCTTCTCGTGCCCAATGCACAGCCATTGTTGGGTTCTGCACAGCATTAACATTTGGTGTCTgtgctttcattttcttgttgtcTGTGAGGTCTGTTTGGGCAAAGATGTTCACAAATGAGATACCCATTATAGAAATGGTCACAAAAGTGCTTCCAGTTCTGGGTTTGTGTGAGATTGGGAATTGGCCCCAAACAGCAACTTGTGGGATCATATCAGGGACAGCACGTCCCTATGTTGGTGCAAGAATAAACTTGTGTGCATTTTACCTTATTGGATTGCCAGTTGCCATTTTTGCTACTTTTGTATACAGATTTGGGTTGGTGGGTTTGTGGTTTGGGATGTTAGCAGCACAGAGTTCTTGTTTATGCTTGATGGTTTGGGCATTGATTCGAACAGACTGGGGGCATCAAACTAAGAGAGCTGTTGAGCTTGCTCAGGTGGCCGGAGAACAGCATAATAGTACTGTGAATGATAATGGTGATggtgatgatgaagaaagtGGGTTGCTTAATTCTGATCTATG 1370 0.4285 MCTGTESQGIINGDDNPLASKAGHEDRMRARDDGDDGIEEGTTTSNNTISRFIHALLNHLHHLLPALSLSEVKEELKSMAKIACPIMMTGLLLYSRQDPEVTRIAQVYIVFSIPELFAQATLNPLRTFLRTQGLTTPLTIAASFSAVAHLPINYFLATYLRLGVKGIALATGLNSINMILGLVFYLRFSDKALKPWEEASFLTAFQGWKPLLSLALPSCVSVCLEWWWYEIMLFLCGLLSDPQTTVATMGILIQTTGFLYVFPFALSAALTTRVGHSLGAGQASRAQCTAIVGFCTALTFGVCAFIFLLSVRSVWAKMFTNEIPIIEMVTKVLPVLGLCEIGNWPQTATCGIISGTARPYVGARINLCAFYLIGLPVAIFATFVYRFGLVGLWFGMLAAQSSCLCLMVWALIRTDWGHQTKRAVELAQVAGEQHNSTVNDNGDGDDEESGLLNSDL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00184 456 Pfam MatE 91 155 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g00184 456 Pfam MatE 217 379 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g00184 456 PANTHER MULTIDRUG RESISTANCE PROTEIN 59 96 - -
Bva01g00184 456 PANTHER MULTIDRUG RESISTANCE PROTEIN 97 433 - -
Bva01g00184 456 MobiDBLite consensus disorder prediction 19 38 - -
Bva01g00184 456 MobiDBLite consensus disorder prediction 434 456 - -
Bva01g00184 456 PANTHER PROTEIN DETOXIFICATION 53 59 96 - -
Bva01g00184 456 TIGRFAM matE: MATE efflux family protein 91 393 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g00184 456 MobiDBLite consensus disorder prediction 1 44 - -
Bva01g00184 456 CDD MATE_eukaryotic 82 422 IPR045069 GO:0042910|GO:1990961
Bva01g00184 456 MobiDBLite consensus disorder prediction 442 456 - -
Bva01g00184 456 PANTHER PROTEIN DETOXIFICATION 53 97 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00184 Bva-Chr1 1517719 1521849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00184 K03327 - gmx:106798137 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00184 01 1517719 1521849 Bva02g00495 02 6331646 6335929 BWGD
Bva01g00184 01 1517719 1521849 Bva01g00184 01 1517719 1521849 ECH