Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00173 ATGGAAGAAGGTGACATTGCCGGAAAGCATGAAATGGTTGGACCCGGAACAGGGAATCGGGTTGAACCAGTTTCAAACTGCAGAGGGGAGAAGAAAAACGACAACTTTAGAGCAGAGATTGATACGTCGGCGCCGTTTGAGTCAGTCAAAGAAGCAGTGAGTAGATTCGGTGGGATTGGTTACTGGAAACCCACACTCTCTGCTCCTCAGCAGCACGAATCGGAAGAGTTTGATGCTGAGAAACTGGAGGAGCAGGCAGAATTATTGGAGAAAGAACTGATCCTGAAAGAAAGGGAAACTCTTGATGTCTTGAAAGAATTGGAAACTACAAGAGGGATTGTTGAAGATTTGAGATCAAAGTTACAGATGGAAGAATGTGAAGTTAACTTGGCCCTTAAGAAATGTGCAAGTGATACGAACTCAACCAtgcaagcaaaagaagaagataaggaAAACCAAGGGATTCAAGTGGGTTCTCTTCAGAATTCAGCTTTAATACTAACTGAATTGAACCAGGCTAAGTTGAATTTAACCAGAACCACTAATGATCTCGCCGATGTTCGAGCTTCTATTGAATCACTCAACAAGAAGTTGGAGAAGGAAAGAGTCTCGCTTGAGAAAACCCGAGAGAGGTTTACTCAGAACTCTTCAAAAATATCTTCTATTGAGGAAGAGCTAAACCCAAAAAGGCTAAGATTCCAAGTGGAGAAAGATGCTGGAATCGAATGTGGTTTGGATAATCCCTCTGATGTTACAAGAGAACTCCAACGGTTAAGTTCCGAAGCCGAGAACTTCAAGAAAATGGGAGAAGCTGCAAGATCAGAAGTGTTGAGGAAAATGTCTGAGATTGAACAGACAAAAACTATGATAAGAACTGCTGAGATCAGGTTGGTTGCAGCAAGAAAGATGAAGGAAGCTGCTAGAGCTGCAGAAGCTGCTGCCCTTGcagaaattaagtttttatctCACCATAAGAGTTCTACCGGAGATTCTACGCGAAATGAAGTAATTCTTTCATTTGAAGAGTATACTGCTTTGACAAACAAAGCTAGAAATGCTGAGGAACAATCTAAGAAGAGGGTTTTGGACTCAATTCTTCAAGTAGACGAAGCAAACTTGTCAAAAATGGATATCTTGAAAAGGGTAGAGGAAGCTACAGAAGAAGTCAAAACCAGCAAGACAATCCTAGAAGAAGTTCTTCAAAGGGTAGAAGCTGCAAATAGGGGGAAGCTTGCAGTTGAAGAAACCCTAAGGAAATGGCGGTCCGAAGGTCTTCATCCTTCTGCACTTAACTCCACAAAGTTGAAGAATTTCTACCCATCTCAAAACGGGAGGGATTCGGTGTTGCTTGATGTAAATGGACTAAATCGGGTAAATGACGAAGCCAACCCAGTCCTAAAGCCAACCCTGTCAATAGGACAGATACTGAGCAGGAAGCTGCTTCAGCGGGATGAGTTGGAAGCTGGAATGCTTGGAGGAAGAACCTCAATGAAACGGAAGGTGTCACTAGCTCAAATGCTTAGCAAGCAAAAAGATGATCCAGACTTGAGAAGGAAAattgagaaggaaaataacCAGAAACACTTTTCTgcaaatagaaagaaatttggATTCAAAAGATTCTCAGTTCTTCTGGCAAAACAGCAAAGTAAGATGAAAAAGCCACTGGATTTGAGGTGATGGCTTTGATCCAATTGTTCTTCACTATTGCTGATAGAGTGAGACTCTAGTTGCTTGTTCTGTGCAGAAAAGTGCTTACTTGGCTAGAATCTGGTTTGTTGTTTAGATTATTTTCAGTTGCTGTTGttgcttgtattttttttattgatatgaaTGAATGCTCAGCCTACTCTCTAACTTGGT 1863 0.3977 MEEGDIAGKHEMVGPGTGNRVEPVSNCRGEKKNDNFRAEIDTSAPFESVKEAVSRFGGIGYWKPTLSAPQQHESEEFDAEKLEEQAELLEKELILKERETLDVLKELETTRGIVEDLRSKLQMEECEVNLALKKCASDTNSTMQAKEEDKENQGIQVGSLQNSALILTELNQAKLNLTRTTNDLADVRASIESLNKKLEKERVSLEKTRERFTQNSSKISSIEEELNPKRLRFQVEKDAGIECGLDNPSDVTRELQRLSSEAENFKKMGEAARSEVLRKMSEIEQTKTMIRTAEIRLVAARKMKEAARAAEAAALAEIKFLSHHKSSTGDSTRNEVILSFEEYTALTNKARNAEEQSKKRVLDSILQVDEANLSKMDILKRVEEATEEVKTSKTILEEVLQRVEAANRGKLAVEETLRKWRSEGLHPSALNSTKLKNFYPSQNGRDSVLLDVNGLNRVNDEANPVLKPTLSIGQILSRKLLQRDELEAGMLGGRTSMKRKVSLAQMLSKQKDDPDLRRKIEKENNQKHFSANRKKFGFKRFSVLLAKQQSKMKKPLDLR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00173 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 30 553 - -
Bva01g00173 559 Pfam Weak chloroplast movement under blue light 38 129 IPR008545 -
Bva01g00173 559 Pfam Weak chloroplast movement under blue light 143 423 IPR008545 -
Bva01g00173 559 Coils Coil 72 99 - -
Bva01g00173 559 Coils Coil 114 134 - -
Bva01g00173 559 Coils Coil 177 215 - -
Bva01g00173 559 Coils Coil 255 275 - -
Bva01g00173 559 MobiDBLite consensus disorder prediction 510 530 - -
Bva01g00173 559 Gene3D - 161 326 - -
Bva01g00173 559 Coils Coil 368 402 - -
Bva01g00173 559 MobiDBLite consensus disorder prediction 1 33 - -
Bva01g00173 559 PANTHER MYOSIN HEAVY CHAIN-LIKE 30 553 - -
Bva01g00173 559 MobiDBLite consensus disorder prediction 508 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00173 Bva-Chr1 1405679 1408109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00173 - - gmx:100783770 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00173 01 1405679 1408109 Bva02g00484 02 6254946 6258157 BWGD
Bva01g00173 01 1405679 1408109 Bva01g00173 01 1405679 1408109 ECH