Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1330 ATGGACTCTCTCTTCGCTTTACTCTGTGTTTTCCCAATGCTGTGGTGGTGCTTCATGATATGGAAGCTATATGATGAGAGGAAAGACCAGGAATGCTTCGTGTTGGACTATCAGTGCCACAAGCCCACCGACGACCGGAAGGTCGGCACGGAGTTCTGCGGGAAGATCATTGCCAGGAACACCCAGTTGGGCCTCGACGATTACAAGTTCGTGCTCAAGGCCGTCGTCAGTTCCGGTATCGGCGAGCAAACTTACGGGCCAAGAAACGTCTTCTTGGGCCGCGAGGCCCGGCCCATTCTAACCGACGCCTTGTGGGAGATGGACGAGTTCTTCCACGACGCCGTTGCCAAGGTCCTGTCCCGATCCCGCCTCGCCGCCTCCGACATCGACGTCCTCGTCGTCAACGTCTCCTTGTTCGCCTCCGTCCCCTCCCTGGCCTCGCGAATCGTTAACCATTACAAAATGAGGGAGGACGTCAAGGTCTACAATCTCACCGGAATGGGATGTAGCGCCAGCCTGATTTCGCTCGACATTATCAGAAGCATTTTCAAATCGCAGAAGAACAAGTACGGCCTCCTGGTCACCTCCGAGTCCCTGAGCCCGAATTGGTACACTGGCAACGACAGATCTATGATTCTCGCGAACTGCCTGTTCCGGTCCGGCGGATGCGCGGTGCTTCTGACGAACAAGAGGGAGCTGAAGAACAGAGCAATCATGAAACTCAAATGCCTCGTGAGAACTCACCACGGCGCTAGGGACGACGCATTCGGATGCTGCACACAGAAGGAAGACGACGAAGGGAGGCTCGGATTTTTCCTCGGAAAATCCCTCCCGAAGGCAGCCACAAGAGCATTCGTCGACAATCTAAGAGTAATCTCACCGAAAATCCTCCCCGTAACAGAGCTAATCAGGTTCATGGTCACGACTCTCATGAAGAAGATGAACAGAACCAGTTCTCAAAAATCAGTGAACATAAATTCCACCAAGTCTCCATTAAACTTCAAAACAGGGGTGGATCATTTCTGTTTACACACTGGTGGGAAAGCTGTGATCGACGGTGTCGGAAATAGCTTGGATCTGAGCGTGTACGATCTGGAACCATCAAGAATGACACTACACCGTTTTGGGAACACATCGGCAAGCAGTCTCTGGTACGTTTTGGGGTACATGGAGGCGAAGAAGAGATTGAAGAAAGGCGATAGAGTATTGATGATAAGCTTCGGTGCTGGATTCAAATGCAATAGCTGTTTGTGGGAGGTACTGAGAGATGCTGAAGACGCAAATGTGTGGGAAGATTGCATCGATGAGTATCCTCCACAGTGCCTGACGAACCCTTTCTTGGAGAAGTACGGTTGGATCAACGACGTTGATGATCCAAACAACTTTCGAATGCCAGATTTTGTCTACCAAGGTTAA 1416 0.5127 MDSLFALLCVFPMLWWCFMIWKLYDERKDQECFVLDYQCHKPTDDRKVGTEFCGKIIARNTQLGLDDYKFVLKAVVSSGIGEQTYGPRNVFLGREARPILTDALWEMDEFFHDAVAKVLSRSRLAASDIDVLVVNVSLFASVPSLASRIVNHYKMREDVKVYNLTGMGCSASLISLDIIRSIFKSQKNKYGLLVTSESLSPNWYTGNDRSMILANCLFRSGGCAVLLTNKRELKNRAIMKLKCLVRTHHGARDDAFGCCTQKEDDEGRLGFFLGKSLPKAATRAFVDNLRVISPKILPVTELIRFMVTTLMKKMNRTSSQKSVNINSTKSPLNFKTGVDHFCLHTGGKAVIDGVGNSLDLSVYDLEPSRMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSCLWEVLRDAEDANVWEDCIDEYPPQCLTNPFLEKYGWINDVDDPNNFRMPDFVYQG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1330 471 CDD CHS_like 20 418 - -
Bisa12g1330 471 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bisa12g1330 471 SUPERFAMILY Thiolase-like 102 421 IPR016039 GO:0016746
Bisa12g1330 471 PANTHER 3-KETOACYL-COA SYNTHASE 17 439 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bisa12g1330 471 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 338 419 IPR013747 -
Bisa12g1330 471 Gene3D - 88 420 IPR016039 GO:0016746
Bisa12g1330 471 Pfam FAE1/Type III polyketide synthase-like protein 26 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1330 Bisa-ChrBisa12 22886779 22888194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1330 20 466 Acyl Lipid Metabolism Gene Families AT2G28630 67.105 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1330 12 22886779 22888194 Bisa02g3779 02 91364889 91366313 CCT
Bisa12g1330 12 22886779 22888194 Bisa12g1330 12 22886779 22888194 ECH