Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1246 ATGTCCTCCGACCATGAATTCGACCCCGACCCTACGCTTCAACCTATCGAGCAACGCCTGGCTTCGGCCACATTGAACTCGTCCGACGGCGAACCGCAGCCTCGCCAAGAAGTGAACGACGAAGACGTCCCTCTATCTGTTATTCAGAGCAATCAAAACTCGGTTCAGGAGCAAGTGGATGAGTTTGGAGAGGCTCGGGACTCTTCTGAACGCGGGGTTGGGCTCGATATGGATGGCCCTTCCTGCCCCAGCAGTAGTGGCTGTGTCGGTGAAAGGGGCAGCACTATTGCAACTAGCGCGTCGGCAATGCACGAGGTCGTTCAATGTGAAATACAGGAGATAAGGATTGATGATACCGTCAATAGAATCTCTGATTCCCGGACGTCGTGGCTTCCTGGCAAACGGCATGGAGATGAGGATGATGCTTCCATATCATGGAGGAAAAGGAAGAAGCATTGTATTATTCTGAGTCATTCTGGTAAACCAATATATTCAAGATATGGAGATGAACACAAACTTGCAGGGTTTTCAGCAACTTTGCAAGCCATCATTTCCTTTATAGAGAGTGGAGGTGACTGTATCAAAGCTGTGAGGGCTGGAAAGCATCAGGTCGTTTTCCTTGTGAAAGGAACAATTTACTTAGTTTGCATCAGCCGCACAGAAGAACCATATGAGTCATTGAGGGGGCAGTTGGAGCTTATTTATGATCAGATGCTTGTTATATTAACAAAGTCAGTAGCCAGATGTTTCGAGAAGAATCCAAAGTTTGATATATCACCCTTGCTAGGAGGGACACACATTGTCTTCTCTTCTCTAATCCACTCTTTCAGTTGGAATCCAGCTACTTTTCTTCATGCCTATACATGTCTTCCTCTTGCATATGCAACAAGGCAAGCTGCGGGTGCTGTCTTGCAAGATGTTGCTGATTCAGGCATTTTGTTTGCAATGCTAATGTGCAGGCACAAGGTAGTCAGTCTTGTTGGTGCTCAGAAAGTTTCTCTTCATCCAGATGATATGCTGCTGTTGGTTAACTTGGTTATGTCATCAGAATCCTTTAGGACATCGGAATCATTTTCTCCTGTTTGCTTGCCAAGATATAATCCATTGGCTTTTTTGTATGCATATATCCATTACTTTGATGATGACACATATTTGATGTTACTAACTGATAGGTCAGATGCCTTTTGTCATCTTAAGGATTGCAGGATTCGTATCGAAATGGTCCTTCTGAAGTCAAATGTCCTTAGTGAAGTTCGGAGATCCTTACTAGATGGTGGAATGCACATTGAGAATCTCCCTGTGGATCCATTACCCCGATTTGGATCATATCCTCATTTGGGGCAGCGCAAACTTTCAACAGATTCCCTTGACAGATTGAAGGAACCTTATTTAGGAATTGCCGGTCCTGGTGGGTTATGTCATTTCATTTATCGCAGTATATATTTGGATCAATATGTATCTTCAGAGTTCTCATCAGTAATTAGCACTCCTCAGCAGCAGAAAAGACTTTATAGAGCTTACCAGAAACTTTTTGTCTCCATGCATGATAAAGGAATTGGACCACACAAAACACAATTTAGAAGAGATGAAAACTATGTTCTTCTATGTTGGGTCACACGAGATTTTGAACTTTATGCTGCCTTTGATCCCCTTGCCGACAAGGCTTTGGCTATAAAGATTTGCAACCGCGTTTGTCAATGGGTAGAAGATGTCGAAAATGAAATATTTTTGCTAGGAGCTGGCCCACTTTCATGGTGA 1758 0.4369 MSSDHEFDPDPTLQPIEQRLASATLNSSDGEPQPRQEVNDEDVPLSVIQSNQNSVQEQVDEFGEARDSSERGVGLDMDGPSCPSSSGCVGERGSTIATSASAMHEVVQCEIQEIRIDDTVNRISDSRTSWLPGKRHGDEDDASISWRKRKKHCIILSHSGKPIYSRYGDEHKLAGFSATLQAIISFIESGGDCIKAVRAGKHQVVFLVKGTIYLVCISRTEEPYESLRGQLELIYDQMLVILTKSVARCFEKNPKFDISPLLGGTHIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAVLQDVADSGILFAMLMCRHKVVSLVGAQKVSLHPDDMLLLVNLVMSSESFRTSESFSPVCLPRYNPLAFLYAYIHYFDDDTYLMLLTDRSDAFCHLKDCRIRIEMVLLKSNVLSEVRRSLLDGGMHIENLPVDPLPRFGSYPHLGQRKLSTDSLDRLKEPYLGIAGPGGLCHFIYRSIYLDQYVSSEFSSVISTPQQQKRLYRAYQKLFVSMHDKGIGPHKTQFRRDENYVLLCWVTRDFELYAAFDPLADKALAIKICNRVCQWVEDVENEIFLLGAGPLSW 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1246 585 PANTHER SAND PROTEIN-RELATED 31 581 IPR004353 GO:0006623
Bisa12g1246 585 MobiDBLite consensus disorder prediction 43 59 - -
Bisa12g1246 585 MobiDBLite consensus disorder prediction 17 33 - -
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 151 168 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 203 217 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 356 379 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 331 347 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 226 254 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 307 320 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 550 563 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 283 304 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 563 583 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 169 189 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 384 410 IPR004353 GO:0006623
Bisa12g1246 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 534 548 IPR004353 GO:0006623
Bisa12g1246 585 MobiDBLite consensus disorder prediction 1 91 - -
Bisa12g1246 585 Pfam Third Longin domain of FUZ, MON1 and HPS1 471 571 IPR043970 GO:0016192
Bisa12g1246 585 Pfam First Longin domain of FUZ, MON1 and HPS1 151 268 IPR043972 GO:0016192
Bisa12g1246 585 Pfam Second Longin domain of FUZ, MON1 and HPS1 312 403 IPR043971 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1246 Bisa-ChrBisa12 21366401 21371826 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1246 12 21366401 21371826 Bisa02g3685 02 89766847 89772883 CCT
Bisa12g1246 12 21366401 21371826 Bisa12g1246 12 21366401 21371826 ECH