LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa12g1240	ATGTTTTGGAAGCTCGCTTCTCTATCTGCCTCCTCTCCTGTGGAGGCAATATTAGACAAGGAGAACTTCACTTTGGAAGAGCTTCTAGATGAAGAGGAAATAATCCAAGAATGCAAGGCTTTAAACAGTCGTCTCATTAACTTTCTGAGGGTTAGAGCTCAGGTTGAGCAATTACTACACTACATTGTTGAAGAACCACCTGAGGATGCTGAAAGCAAACGGGCCTTCAAGTTTCCTTTCATTGCCTGTGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACATTGGTGGAGGAAGAAGAGCTGATGAACTTACTATTCTCCTTCTTGGAACCTAACCGTCCTCATAGTGCCTTGCTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGGAAGACTGTGCCTCTGATGAATTATGTTCAAGCCCATCAGAATGTTTTTTGCCAGCTGGTTGATTTGATAGGGATTACATCCATTATGGAGGTTTTGGTTCAATTAGTTGGTGCCGATGACCATGTGTATCCCAACTTTATAGATGTGGTACAATGGTTGGTTGAGAGCAACCTGCTAGAGATGATTGTTGATAAATTAAGTCCATCTAGTCCTCCTGAAGTTCATGCCAATGCAGCAGAAACATTGTGTACAATAACTCGAAATGCTTCATCTGCACTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCAAGAGTTTTGGGTCATGCTTTGGAAGATTCACAGTCAAAGTCCAGCCTTATTTACTCTCTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAAGTCAGCAGGCGCTACTCCTCTTTTTCATTCTTTCCGTAGTCAACACATGTATGAGACTCCAGTTCCTGTTAATCCAGAGACTATTGGTGCAATGCTTCAGAAACTTGGTGACTTGCTTATGCTTTTGCATGTGTCATCTGATGAGAAGGTATTGCCTACAACTTATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTAAAGATTGTTGAGTTTATTGCAGTACTTCTGAAAACTGGAAATGAAGTGGCAGAAGTAGAACTGGTCAAATCAGGAACTATTCGAAGGATTATTGATCTTTTCTTTGAGTACCCATACAATAATGCATTACACCATCATGTAGAAAGTATAGTACTATCATGTTTGGAGAGCAAATCAGATGCTATCGTTGATCATCTTCTTCGAGAGTGTGATTTAATTGGAAAAGCTCTTCAGGCAGATAAAAATCCTGTTCTTTCTGGTGACATCGGCAAGCCAACAGTAGCTGCTGCTGGAAAATGGTCGCCACGGGCGGGAAACATTGGACATATAACTCGGTTCGCTAACAAACTTGTTCACTTGGCTCATAACGAAAGCTGCATACAGGCCTGTCTTCGGGAAAAAAGTGAGTGGAATGAGTGGCAAGCTACAGTTCTGCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCTACTACATTACAAGATCGGATAAGGGATAGTGATGATGATGACCTTCACAATAGAGACTACGATGTTGCAGCATTAGCAAATAATTTGAGCCAAGCCTTTAAATATAAAATTTACGGAAATGAGGATAACGAAGAGGACCATGGAGGACTTGATCGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTTGTCATATCATCCCTAAGACTTGGTGATGATCAAGGAAGTAGTCTTTTTACAAACTCCAACTGGTTTGCTTTCCAAGATGACACAACTGATAATGCACCTGGTGGAACATCATCATCTGAGATGATGGATGAGATTAGTTTGAATGGGGCTGCAAATGGTGGTAACAATAGTAGTGATGATGAGGTAGTTGTCGGAGAGGACGAAGAAATGGTTGACAGCAAAAATAAAGTGAATGGCACATCTAGCCTTAGCACAGACTTCTTCAGTGGATTAACTGATAGCAATTGCATGAATGGTGGCACTTTGAACTTGGAAAGTGAGAAGGCAAGTGCTGCACGTGATATGGGATTCTTCAGATTTGAGGCATCGGACAATGAGGATTTGTTTGGGCAAAGGCCATTACCTGACTGGGTGGGATGGGCTGAACCATCAGATATGCAAGTTGCTGGTTCAAGCACAAATCCCTTTGTAGATCATGATGAGTCTGATAGCAATCTATCCACGAAACCTCAAGTGAGCAGCCCTAATTCTAGTTTGCCTTCAAATGGGGAATCTGCACCGTCAAATGGGTCGCCAACTACTAGCAATTCGAGTGAGCGGGAAGGGGACTTGAGTCAAAGATTGGTAGCGGTACCCTCACTATTTGAAGAGGATGTTGAATTTGTAGGTGTGGAATTAGAAGGTACCGAGAAAGCTATGGAACAGGCCCTGAAAGAAGGGATTGTCGGGGAAGCAGGACCATTAAAAAGAAATGTAACCCCAAAATCTCCAGAAAAAAAGGAGAACTCTGAGGAGGGCGGACCTGGAATGAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAAGAGGTTGCTGTTCTGGAGTGA	2565	0.4234	MFWKLASLSASSPVEAILDKENFTLEELLDEEEIIQECKALNSRLINFLRVRAQVEQLLHYIVEEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFCQLVDLIGITSIMEVLVQLVGADDHVYPNFIDVVQWLVESNLLEMIVDKLSPSSPPEVHANAAETLCTITRNASSALAIKLSSPSFVARVLGHALEDSQSKSSLIYSLSVCISLLDPKKSAGATPLFHSFRSQHMYETPVPVNPETIGAMLQKLGDLLMLLHVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEVELVKSGTIRRIIDLFFEYPYNNALHHHVESIVLSCLESKSDAIVDHLLRECDLIGKALQADKNPVLSGDIGKPTVAAAGKWSPRAGNIGHITRFANKLVHLAHNESCIQACLREKSEWNEWQATVLQERNVVENVHRWACGRPTTLQDRIRDSDDDDLHNRDYDVAALANNLSQAFKYKIYGNEDNEEDHGGLDRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDTTDNAPGGTSSSEMMDEISLNGAANGGNNSSDDEVVVGEDEEMVDSKNKVNGTSSLSTDFFSGLTDSNCMNGGTLNLESEKASAARDMGFFRFEASDNEDLFGQRPLPDWVGWAEPSDMQVAGSSTNPFVDHDESDSNLSTKPQVSSPNSSLPSNGESAPSNGSPTTSNSSEREGDLSQRLVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVTPKSPEKKENSEEGGPGMKEFNDANYWRVDQEVAVLE	854

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa12g1240	854	MobiDBLite	consensus disorder prediction	711	768	-	-
	Bisa12g1240	854	MobiDBLite	consensus disorder prediction	710	769	-	-
	Bisa12g1240	854	MobiDBLite	consensus disorder prediction	807	842	-	-
	Bisa12g1240	854	Pfam	SIT4 phosphatase-associated protein	131	352	IPR007587	GO:0019903\|GO:0043666
	Bisa12g1240	854	Pfam	SIT4 phosphatase-associated protein	356	490	IPR007587	GO:0019903\|GO:0043666
	Bisa12g1240	854	PANTHER	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	1	828	IPR007587	GO:0019903\|GO:0043666
	Bisa12g1240	854	MobiDBLite	consensus disorder prediction	818	833	-	-
	Bisa12g1240	854	SUPERFAMILY	ARM repeat	36	562	IPR016024	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa12g1240	Bisa-ChrBisa12	21213074	21222270	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa12g1240	12	21213074	21222270	Bisa02g3680	02	89689617	89691242	CCT
	Bisa12g1240	12	21213074	21222270	Bisa12g1240	12	21213074	21222270	ECH