Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1195 ATGGATTCTCTCTTTTGCGTGGTTGTATTCTCTCTCATGATTTCTTCAGGCATTGCTCAGCTTCCACCCTCACCTGACTTCTATCCTAGTTCCAGAATTAGTCCTTTAAGCTTTGATCAAGGGTTTAGAAACCTATGGGGAACTCAGCATCAAAGATTAGAGCAGGGCTCTTTAACAATCTGGCTTGACTCAACCTCTGGGAGTGGATTCAAGTCTCTGCACTCTTATAAATCTGGATACTTCGGTGCTGCAATTAAGCTTCAACCTGGTTATACTGCAGGAGTCATTACATCTTTATATCTTTCAAACAACCAAGACCACCCGGGAAACCATGATGAAATTGACATTGAGTTCCTTGGTACCACACCAGACAAGCAATATGTGTTGCAGACAAATGTATACATGAGAGGAAGTGGAGATAGGAAGAATATTACTGGAAGAGAAATGAAGTTCCATCTTTGGTTCGACCCAACACAGGATTTTCACAACTACGCTATTCTCTGGAAACCCACTGAGATAATATTTTTAGTGGATGATGTGCCCATAAGGAGGTTTCCTCGGAAGAGTGAGGCTACATACCCTACAAGACCAATGTATGTGTACGGATCGATATGGGATGCATCTTCTTGGGCTACAGAGGATGGAAAATACAAAGCAGATTATAGGTACCAGCCCTTCATTGGTAGGTACAAAATGTTCAAAGTGCAGGGTTGCGCCACTGAAGGCCTGGCCACGTGTCAACCACCCTCTGCCTCATCCTCTGGCCATGCCAGTCTCAGCCCTCAACAACACAAGGCCATGCAGTGGGTCCAAAACAACTACTTGGTTTATTACTACTGCCATGACCCCAAGAGAGACCATGACCTTACTCCTGAGTGCTAG 882 0.4456 MDSLFCVVVFSLMISSGIAQLPPSPDFYPSSRISPLSFDQGFRNLWGTQHQRLEQGSLTIWLDSTSGSGFKSLHSYKSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDKQYVLQTNVYMRGSGDRKNITGREMKFHLWFDPTQDFHNYAILWKPTEIIFLVDDVPIRRFPRKSEATYPTRPMYVYGSIWDASSWATEDGKYKADYRYQPFIGRYKMFKVQGCATEGLATCQPPSASSSGHASLSPQQHKAMQWVQNNYLVYYYCHDPKRDHDLTPEC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1195 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 16 230 IPR000757 GO:0004553|GO:0005975
Bisa12g1195 293 PIRSF EndGlu_transf 3 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bisa12g1195 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 257 293 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Bisa12g1195 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 37 293 IPR044791 GO:0004553
Bisa12g1195 293 Pfam Glycosyl hydrolases family 16 39 222 IPR000757 GO:0004553|GO:0005975
Bisa12g1195 293 FunFam Xyloglucan endotransglucosylase/hydrolase 26 293 - -
Bisa12g1195 293 Gene3D - 18 293 - -
Bisa12g1195 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 293 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1195 Bisa-ChrBisa12 20311111 20312351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1195 3 293 Glycoside Hydrolase AT3G44990 65.636 1.08e-141 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1195 12 20311111 20312351 Bisa02g3619 02 88651131 88653222 CCT
Bisa12g1195 12 20311111 20312351 Bisa12g1195 12 20311111 20312351 ECH