Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1101 ATGGAATTAGGAAGCATACTTCACTTCCTGGAGGACAAGACCATTTTAGTCACTGGTGCCACTGGTTTTCTTGCCAAAATTTTTGTGGAGAAGGTGCTGAGGGTTCAACCAAACGTAAAGAAACTGTATCTTCTTTTGAGAGCCAAAGATACCAATTCTGCCACTCAACGCTTACACACTGAGATCATAGGGAAGGAGTTGTTCAGAGTGTTGAAGGAAAAAAAGGGTGCAGAATTCAATTCCTTCGTCTCAGAGAAGCTCACTGTGGTGCCAGGCGACATTTCTCACGAAGACTTGAATTTGAAGGACTCAGTTCTAACAGAAGAAATTTGCAATCAAACAGATGTTATAGTTAATTTAGCAGCAACTACTAACTTCGATGAAAGATACGATGTTGCATTGGGTATAAATACCTTAGGAGCTAAGCATGTCTTGAGGTTGGCCCAAAAATGTAGTAAACTGAAGGTGCTTGTGCATGTTTCAACGGCATACGTATGTGGGGAGAAAGGAGGACTGATAGCAGAGGACCCATACGAAATGGGTGAGTCACTGAATGGAGTGGGTGGACTTGACATTGAAGCAGAGAAGAAATTGGTGGAGGAAACTCTGAATCATCTTAAAGAGGAGGCAGTCACAGAACATGAAGTTAAAGTTGCCATGAAGGAATTAGGTCTCCAAAGGGCAAACAAATACGGATGGCCAAACACATACGTGTTCACAAAGGCGATGGGAGAGATGCTTGTTGGAAGCTTAAAGGGGAATTTGCCTGTTGTGATAGTACGTCCCACCATTGTGACCAGCACTTTCTCAGACCCCTTCCCTGGTTGGGTTGAAGGTGTGAGAACCATAGACAGTTTGATTGTTGCTTATGGTAAGGGAAAATTAACTTGCTTCCTTGCGGACATGGAGGCAGTTTTTGACGTGATACCGGCAGACATGGTGGTGAATGCAATGCTAGTGGCGATGGTGGCCCATGCGAATCAGTGTGACGATATAATCTATCATGTGGGTTCCTCTATGAGAAATCCCATAAGATATATTGATTTCAAAGATTATTGCATCAGATACTTCGCATCGAAGCCATTAAGAAACAAAGATGGTAAGATTGTCAAGGTTGGCCAAGTTACCATCTTCGACAGCATGCATAGCTTCCGCAGATACATGTTCATGCGCTACATGCTTCTCTTGAAGGGACTAGAGGTGGTCAATGCAGCTTTTTGCCAGTACTTTCGAGGAGTGTACGTTGAGCTTAACAGGAAGATTCAGATTGTGATGCGCTTGGTTGATCTTTACAGGCCTTACTTGTTCTTCAATGGCATATTTGATGATATGAACTCAGAGAAGTTGCAAATAGCGGCAAGCCAATGTGGGGTTGAGATGGATATGTTTTGTTTTGACCCTAAGATGATTGATTGGGAGGATTACTTTATCAATATCCATATTCCTGGCATCGTTAAGTATGTACTCAAGTGA 1473 0.4277 MELGSILHFLEDKTILVTGATGFLAKIFVEKVLRVQPNVKKLYLLLRAKDTNSATQRLHTEIIGKELFRVLKEKKGAEFNSFVSEKLTVVPGDISHEDLNLKDSVLTEEICNQTDVIVNLAATTNFDERYDVALGINTLGAKHVLRLAQKCSKLKVLVHVSTAYVCGEKGGLIAEDPYEMGESLNGVGGLDIEAEKKLVEETLNHLKEEAVTEHEVKVAMKELGLQRANKYGWPNTYVFTKAMGEMLVGSLKGNLPVVIVRPTIVTSTFSDPFPGWVEGVRTIDSLIVAYGKGKLTCFLADMEAVFDVIPADMVVNAMLVAMVAHANQCDDIIYHVGSSMRNPIRYIDFKDYCIRYFASKPLRNKDGKIVKVGQVTIFDSMHSFRRYMFMRYMLLLKGLEVVNAAFCQYFRGVYVELNRKIQIVMRLVDLYRPYLFFNGIFDDMNSEKLQIAASQCGVEMDMFCFDPKMIDWEDYFINIHIPGIVKYVLK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1101 490 Gene3D - 8 383 - -
Bisa12g1101 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 338 IPR036291 -
Bisa12g1101 490 Pfam Male sterility protein 17 318 IPR013120 -
Bisa12g1101 490 CDD FAR-N_SDR_e 13 361 - -
Bisa12g1101 490 CDD FAR_C 414 489 IPR033640 -
Bisa12g1101 490 Pfam Male sterility protein 392 490 IPR033640 -
Bisa12g1101 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 490 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1101 Bisa-ChrBisa12 17998859 18005520 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1101 110 489 Acyl Lipid Metabolism Gene Families AT4G33790 61.316 1.31e-179 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1101 12 17998859 18005520 Bisa02g3552 02 87402003 87409610 CCT
Bisa12g1101 12 17998859 18005520 Bisa12g1101 12 17998859 18005520 ECH