Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0887 ATGAGTCGCCACAACGAGTACGATAATCCCTTTGCGCCATTGGCTAGGACCGCACTGGAGGCAATCCATTTTGGTTCTAGAGTGCTGCCCAACTGTGGCATTGGTCATATGCAGTGGCGGAGCCACAAGCTGGAACCAAAACGAAACGAAGATGTTGTATCTAGGGGTATGGTTTTGTGCCTTCTTTGGAATGTCGTGGCAGTTTGTGCGGCTGGTGTGCGGGGGTCAGGTTCTGAAATCATAATTGCGTCTGTCGGCTGCTTTATAGTTGGCGTTCCAGGAGCTTACTTCGGGTGGTATCGCCCTCTCTATCGTGCCTTGAGAGGAATTTTGCCTGCACTTACTCTGTTGACCTCCAATGAACCCATTGGAATATTATACTTGATTGGGTTTGGACTTTTCTGCGTTGAGTCATTGCTGAGCATCTTTGTTATTCAGCAAGTATTCATGCATTTCCGGGGTAAGAAGGCTGCAGAGGCTAAGCGTGAGGCCGCCTAA 498 0.492 MSRHNEYDNPFAPLARTALEAIHFGSRVLPNCGIGHMQWRSHKLEPKRNEDVVSRGMVLCLLWNVVAVCAAGVRGSGSEIIIASVGCFIVGVPGAYFGWYRPLYRALRGILPALTLLTSNEPIGILYLIGFGLFCVESLLSIFVIQQVFMHFRGKKAAEAKREAA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0887 165 Pfam SCAMP family 57 108 IPR007273 GO:0015031|GO:0016020
Bisa12g0887 165 Pfam SCAMP family 108 154 IPR007273 GO:0015031|GO:0016020
Bisa12g0887 165 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 56 108 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0887 Bisa-ChrBisa12 14511198 14520079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0887 56 165 Miscellaneous Gene Families AT2G20840 45.638 2.38e-27 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0887 12 14511198 14520079 Bisa02g3309 02 82753497 82769023 CCT