Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0698 ATGTGCGCTTCCAAAGATAGAATCCTTGGCAATCTGAGGACCCTGTTACGTTCAGTGGGCATAACAAGTACTTCTCAGTTTAAATATTCTCCTCCAAGCTCGTCCCTTTCGGAAGCATGTAGTTCGAGACTCGACAGTGAATATACGCTCTCAAGCCTCAAGCTTAAGCGAGTCTCTGAGTCAGAGGAAACGCCGAGTCTGGTGTATCAGCGAATCCATTCAATATTGCACAGTAAGTGTTTGTTAAATATAATAGAAGATGGTCAGTTGGTAAAGGGACCTGATGCTCAGGATGTTGATGATGCAAAAGATTTGGAAAAAATACCAGATATATCATGGTTATCTAACACAGCTCATAGTAATATATCTCTGCAACGAAAAGGGCTATCTCGTGAAAGGAAACGAAATTGTATGTTTGAATTCAGACAATTGAACCGCTTTAGCAAGTTAGTTACAATATGTGCAGATAAACTGGGAACAGAGGCAACGGTTAAGTTGTTCAGTAAACTGGGATGGGAACTGGATGTGAAAGATTACAATGCAGTGATAGGAATATGCATAGATAAGGCCAGGGAAACCGAAGATGAAGAAGCTGCAATAGAAGAAATGGCCAAGGCATTCCACCTCATTAAATCAATGAGGGAACAAGGTTTTCAGCTTGAAGAAAAAACATACCGCCCACTTCTTTTGCATATCATAAACATGGGTATGGTAGGAGAATTTCAGTTTTTTATTGATCTTATTAAAGACAAGAATCCCAGCTCTAATTCAAGATTGGGTTACTATGAAATGATGCTCTGGCTAAGAGTTAATAATGAAGAAAAGATTCAAGATCTCTGTAACTATATTGCACACAATAATGGTGCAGACACTTCAGATTTACGAGAAAATTATTTACTGGCTCTTTGTGAAAGTGATCGGAAGAAGGAGATTTTGCAGGTGTTGGAAATTGTAGATTTAAAAAGGCTTTCATCTGCAGAAACTAAAGTGAAGATATCTCAATCATTAGGAAGGCTACTATTGGAATCTGTTGCAGAGAAGTTCCTTTTGGATTTCAAAAGATGTGATCATGAAGCCGATAATATCACAAACTTCATTGCCAGTTATGCTGTTAGCATACCCAATTTAGCGGTGGAGGATGTCATCTCAAAATTCAAAGAATTGCACCAAAGGCTGAAAGTTCCACCTTCATCATCATCATATGAGAAGCTTATTTTGCACAGTTGTGACTTGCTGGAGGTGCATGTAGCTCTTGATATTATTGATGAAATGTGTGAAGGAGGCTTTACCTTATCAACTGAGATGTTGCACTCCATATTGCAAATTTGTGAGGAAACCTGCAAATATACTTTGGTCCATCGGATCTACTCTACCATATGTCGCTATAATTTGGAGTCAAATAACGAAACATTCAGGCATATAATAATCTTGTTCATGAAGCTAAAAGATTTTGAAAGTGCACATAAGATGCTTGATGATTTGGAGGAAAGGAATGTGAAGCCTAGTACAAGCATGTACAATGCTATAATGGCAGAATCTTTTCGAGAGAAAAACATTCCTGACGGGCTGAGAGTACTTGAGCACATGCAGCGTGCCAATGTAAAACCTGATTCACAGACCTTTAGCTATCTGATTAGTATCTCTGAAACTAAAGAGGATATAGACAAGTATTATGAAGAACTGAAGCTGTCTGGATTCCAAGCCACAAAGCAAATTTTCACGACCCTTATAAATGCATATGCAGCCTGTGGAGAGTTTGAGAAGGCAAAAGAGGTCGTCTTGGACCCATTCATACCAGTGAGAATCTTGAATGAAATCAAGGGTGTGCTTGTCTCCAGTCTTGCATCACACGGGCGATTGTCTGAGGCTCTTCTTATTTATGAGGAAATCAAACACTCTGGACAAAGTTTGGAGCCAAGAGCTCTTATGAGTCTCATTGAGCACACTGAATCCGATGGAGAGTTAGAAAGGTTGCTCTTGCTACTTGAGGATTTCCATGATCCAGACTACTGGATTGATGCTTGCTGCAGAATTATATTGTACTGTGTTAAGAACAAGCGTATAAGTTCTGCTGTTGACTTGTGTAAGCAACTCAAGAATAAGTTCCCAAGTGATGAACGTGTTAGGGAAGTTCTCTTTAAGAAGGTATTTTCTTTAATTGAAGATTCAGGGTCAACACATTTGCACACTGGGCTGGAGTTGCTTTGGGAAATAAAGGATAAGCTTGGCCTTTTGCCTTCAAAGGAAATGTCATGA 2256 0.3923 MCASKDRILGNLRTLLRSVGITSTSQFKYSPPSSSLSEACSSRLDSEYTLSSLKLKRVSESEETPSLVYQRIHSILHSKCLLNIIEDGQLVKGPDAQDVDDAKDLEKIPDISWLSNTAHSNISLQRKGLSRERKRNCMFEFRQLNRFSKLVTICADKLGTEATVKLFSKLGWELDVKDYNAVIGICIDKARETEDEEAAIEEMAKAFHLIKSMREQGFQLEEKTYRPLLLHIINMGMVGEFQFFIDLIKDKNPSSNSRLGYYEMMLWLRVNNEEKIQDLCNYIAHNNGADTSDLRENYLLALCESDRKKEILQVLEIVDLKRLSSAETKVKISQSLGRLLLESVAEKFLLDFKRCDHEADNITNFIASYAVSIPNLAVEDVISKFKELHQRLKVPPSSSSYEKLILHSCDLLEVHVALDIIDEMCEGGFTLSTEMLHSILQICEETCKYTLVHRIYSTICRYNLESNNETFRHIIILFMKLKDFESAHKMLDDLEERNVKPSTSMYNAIMAESFREKNIPDGLRVLEHMQRANVKPDSQTFSYLISISETKEDIDKYYEELKLSGFQATKQIFTTLINAYAACGEFEKAKEVVLDPFIPVRILNEIKGVLVSSLASHGRLSEALLIYEEIKHSGQSLEPRALMSLIEHTESDGELERLLLLLEDFHDPDYWIDACCRIILYCVKNKRISSAVDLCKQLKNKFPSDERVREVLFKKVFSLIEDSGSTHLHTGLELLWEIKDKLGLLPSKEMS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0698 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 536 IPR002885 -
Bisa12g0698 751 Gene3D Tetratricopeptide repeat domain 363 527 IPR011990 GO:0005515
Bisa12g0698 751 Gene3D Tetratricopeptide repeat domain 144 348 IPR011990 GO:0005515
Bisa12g0698 751 Pfam Pentacotripeptide-repeat region of PRORP 413 561 IPR033443 -
Bisa12g0698 751 PANTHER OS02G0132600 PROTEIN 38 749 - -
Bisa12g0698 751 Pfam PPR repeat 573 592 IPR002885 -
Bisa12g0698 751 Pfam PPR repeat 609 634 IPR002885 -
Bisa12g0698 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 467 501 IPR002885 -
Bisa12g0698 751 Gene3D Tetratricopeptide repeat domain 548 721 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0698 Bisa-ChrBisa12 11045469 11059597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0698 366 657 Glycosyltransferase AT1G05670 20.199 3.09e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0698 12 11045469 11059597 Bisa12g0698 12 11045469 11059597 ECH