Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g0599 | ATGATTATGAATAATGCTAATTTGATTATAAGATTTGTAAAGAGACTGTTAAGTATGGGAGATCGTTTGAGGCCCGTTTCCATTGAGGAATTGCCATCACATTTGATTTTAGAAATTTTAAGCTGTGGCAGGCTCAGTGCAGTCGATCTTGTTTGCTTAGAGTTGACCTCAAAGACTTTTGGTGGCAGTCATGGTTTGTGCTACCCTTTAAAGTTCCGATCATTGGTGGACTTTGCAACATTTCAGCTGTGCACCTCCCATTTAATCTATTCTAGGATGGGATTGAATTCTCAGAGGGAGTTATATGATCGATGTGGTGGAAACTGGAAGCGAGTTTTGCGGTTCTTGCGGTCAGTGGAACAATCCTCTGGGATGGTCGAGACATCATCAGGCAATATGCAAATTACAACTGGAAAATATCACACCTTTTTGATCAGCAGCTCCTCTGTCTACTCTTGTGGTTCTGGCCTGTGTGGTGTACTTGGTCAAGGGCCTGAAACAACACAATGTGTAGCATTTACGCGGATTGATTTCCCACCTTTGGCACGCATATTTCAAGTTTCAGCCTCCTATAATCATGCAGCTTTCGTTATGCAATCTGGAGAGGTATTCACGTGCGGAGATAATTCATCATCTTGCTGTGGGCATAGTGATACAAGCCGACCTGTTTTTAGGGCACGACTTGTTGAAGCCCTAAAGGGGGTTCATTGCAAGCAGGTTGCAGCAGGTCTTAACTTTACAGTCTTCCTCTCAAATGAAGGTCATGTTTTTACATGTGGCAGCAACACACACGGTCAACTTGGTCATGGTGACACTCGGGACAGACCAACTCCAAAAATGGTTGAAGTTCTTGATAATGTTGGCTCTGTTGTTCAGATTGCTGCTGGACCAACCTATGTCTTAGCTGTCACAGAAAATGCTGAAGTATACTCCTTTGGATCAGGTGCTAATTTCTGCCTTGGCCATGGTGAGCAACATAACGAGTTTCAGCCTCGCGCAATACAGACATTTAGAAGAAAAGGTATTCATGTTGTCCGTGTTTCTGCTGGTGATGAGCATGCAGTGGCACTTGATTCAAATGGATTTGTATATACTTGGGGCAAGGGTTACTGCGGTGCCTTAGGTCATGGAGATGAGATTGATAAGACAACTCCGGAGATCTTGACTACACTCAAGAGTCACTTGGCTGTCCAGGTGTGTGCGAGAAAGAGGAAAAGCTTCGTTCTGCTGGATTCTGGTTCAGTGTATGGATTTGGATCGATGGGATTTGGTAGCCTTGGATTTGTGGACACAAGGATATGTGACAAAGTATTGAGGCCTCGAGTCCTTGACACCTTAAAGTCTCACCATGTTTCTCAGGTTTCCACTGGACTGTACCACACTGTTGTAATCACCAACACAGGACACATCTTTGGGTTTGGAGACAATGAAAGAGCTCAGCTTGGGCATGACACATTAAGGGCTTGTCTCCAGCCAACTCAAATCTTCATTCAACATGAAGGTGATGATGAACTGATAATGTAG | 1524 | 0.4403 | MIMNNANLIIRFVKRLLSMGDRLRPVSIEELPSHLILEILSCGRLSAVDLVCLELTSKTFGGSHGLCYPLKFRSLVDFATFQLCTSHLIYSRMGLNSQRELYDRCGGNWKRVLRFLRSVEQSSGMVETSSGNMQITTGKYHTFLISSSSVYSCGSGLCGVLGQGPETTQCVAFTRIDFPPLARIFQVSASYNHAAFVMQSGEVFTCGDNSSSCCGHSDTSRPVFRARLVEALKGVHCKQVAAGLNFTVFLSNEGHVFTCGSNTHGQLGHGDTRDRPTPKMVEVLDNVGSVVQIAAGPTYVLAVTENAEVYSFGSGANFCLGHGEQHNEFQPRAIQTFRRKGIHVVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIDKTTPEILTTLKSHLAVQVCARKRKSFVLLDSGSVYGFGSMGFGSLGFVDTRICDKVLRPRVLDTLKSHHVSQVSTGLYHTVVITNTGHIFGFGDNERAQLGHDTLRACLQPTQIFIQHEGDDELIM | 507 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0599 | 507 | PRINTS | Chromosome condensation regulator RCC1 signature | 308 | 324 | IPR000408 | - | |
| Bisa12g0599 | 507 | PRINTS | Chromosome condensation regulator RCC1 signature | 454 | 470 | IPR000408 | - | |
| Bisa12g0599 | 507 | PRINTS | Chromosome condensation regulator RCC1 signature | 344 | 357 | IPR000408 | - | |
| Bisa12g0599 | 507 | PRINTS | Chromosome condensation regulator RCC1 signature | 363 | 379 | IPR000408 | - | |
| Bisa12g0599 | 507 | PRINTS | Chromosome condensation regulator RCC1 signature | 470 | 484 | IPR000408 | - | |
| Bisa12g0599 | 507 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 360 | 401 | IPR000408 | - | |
| Bisa12g0599 | 507 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 308 | 357 | IPR000408 | - | |
| Bisa12g0599 | 507 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 253 | 303 | IPR000408 | - | |
| Bisa12g0599 | 507 | CDD | F-box_SF | 29 | 60 | - | - | |
| Bisa12g0599 | 507 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 183 | 495 | - | - | |
| Bisa12g0599 | 507 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 186 | 211 | - | - | |
| Bisa12g0599 | 507 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 451 | 479 | - | - | |
| Bisa12g0599 | 507 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 254 | 306 | IPR000408 | - | |
| Bisa12g0599 | 507 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 413 | 467 | IPR000408 | - | |
| Bisa12g0599 | 507 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 454 | 464 | IPR000408 | - | |
| Bisa12g0599 | 507 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 347 | 357 | IPR000408 | - | |
| Bisa12g0599 | 507 | Gene3D | - | 114 | 285 | IPR009091 | - | |
| Bisa12g0599 | 507 | Gene3D | - | 286 | 504 | IPR009091 | - | |
| Bisa12g0599 | 507 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 361 | 412 | IPR000408 | - | |
| Bisa12g0599 | 507 | SUPERFAMILY | RCC1/BLIP-II | 128 | 432 | IPR009091 | - | |
| Bisa12g0599 | 507 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 307 | 360 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g0599 | Bisa-ChrBisa12 | 8880673 | 8887039 | Dispersed/Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa12g0599 | 12 | 8880673 | 8887039 | Bisa12g0599 | 12 | 8880673 | 8887039 | ECH |