Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0597 ATGACGTGGCAGGTAAGCCATGCTGCTGACTATCTTATCCTATCAAATCCAGTAGACATACTTCACTATATAACTTCGTCTTCATCTTGGTGGGTGGAATATAGTAAAACCCATTTCATAGAATTTACAGTTTCCAAATCCAATGGCTCTCCAGGCTGCTGCTTCCTTGGTTCCCGCTGCTCTCTCTATTCCCAAAGAGGTTTTGCTTCTGAATCCCCATGGAATCTCCTTCTTGGAAAATCTGGCGCTTCTTTCAAGGACTCAACCCTGTTTGGGCTTTCATTATCAGATAATCTCAGAGCGGACTCCAGCTCTTCTGCATTGAGGTGCAAGCAAAAAGTTGGCGCTGTGAGGGCCCAGATAGTGGCTACTACAACTCCAGCAGTTAACAGGGCTGCCCCAGAAGGCAAGAAAACGCTGAGGAAGGGAAGTGTTGTGATCACTGGGGCCTCCTCTGGGTTGGGTCTGGCCACTGCTAAGGCTTTGGCTGAGACGGGAAAATGGCATGTCATTATGGCCTGCAGGGACTTCCTCAAAGCTGAAAGAGCCGCGAAATCTGCTGGCATGACCAAGGAAAACTACACCATCATGCATTTAGACCTTGCCTCTCTTGACAGTGTCCGTCAATTTGTTGACAACTTCAGGCGATCGGGCATGCCTCTTGATGTTCTGGTCTGCAATGCTGCTGTTTACTTGCCAACTGCTAAGGAGCCTACTTTCACTGCTGAAGGATTTGAGCTCAGTGTTGGGACAAACCATCTGGGGCATTTTCTCCTCTCGCGCTTGCTGCTTGAGGACTTGAACAAGTCCGATTATCCATCGAAGCGTATGATCATCGTCGGCTCAATCACAGGAAACACAAATACATTGGCCGGAAATGTGCCTCCCAAGGCGAACCTTGGTGACATGAGGGGACTTGCAGGAGGGCTAAACGGGCTAAACAGTTCGACTATGATCGATGGTGGAGACTTTGATGGCGCCAAGGCATACAAGGACAGCAAAGTCTGCAATATGCTGACAATGCAAGAGTTTCACAGAAGATACCATGAAGAAACTGGGATCACATTTGCTTCCCTTTACCCTGGTTGCATTGCCACAACCGGCTTGTTTAGAGAGCACATTCCCTTGTTCAGGCTCTTGTTTCCTCCATTCCAGAAGTACATTACCAAAGGCTTTGTATCAGAAGATGAAGCAGGAAAGAGACTTGCTCAGGTTGTGAGTGATCCTAGCTTGACAAAATCTGGTGTTTACTGGAGCTGGAACAAGGACTCTGCTTCATTTGAAAACCAGTTGTCACAAGAGGCCAGCGATGCAGAGAAGGCACGCAAGGTGTGGGAGGTAAGCGAGAAGCTTGTGGGTTTGGCCTAA 1368 0.4825 MTWQVSHAADYLILSNPVDILHYITSSSSWWVEYSKTHFIEFTVSKSNGSPGCCFLGSRCSLYSQRGFASESPWNLLLGKSGASFKDSTLFGLSLSDNLRADSSSSALRCKQKVGAVRAQIVATTTPAVNRAAPEGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMTKENYTIMHLDLASLDSVRQFVDNFRRSGMPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSKRMIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGLNSSTMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDAEKARKVWEVSEKLVGLA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0597 455 CDD LPOR_like_SDR_c_like 142 454 - -
Bisa12g0597 455 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 79 455 IPR005979 GO:0016630
Bisa12g0597 455 Gene3D - 133 455 - -
Bisa12g0597 455 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 423 IPR036291 -
Bisa12g0597 455 PRINTS Glucose/ribitol dehydrogenase family signature 352 369 IPR002347 -
Bisa12g0597 455 PRINTS Glucose/ribitol dehydrogenase family signature 219 230 IPR002347 -
Bisa12g0597 455 PRINTS Glucose/ribitol dehydrogenase family signature 144 161 IPR002347 -
Bisa12g0597 455 NCBIfam protochlorophyllide reductase 141 455 IPR005979 GO:0016630
Bisa12g0597 455 Pfam short chain dehydrogenase 145 287 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0597 Bisa-ChrBisa12 8872975 8875312 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0597 12 8872975 8875312 Bisa12g0597 12 8872975 8875312 ECH