Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0596 ATGAGCAAAGCCGGGGACGAAGAAGACGAAGAAGTCTGCTTCTACGAGTCCAACGACCGCTTACTTTCGTCCTCTTGCTCCTGCTCCACTTCCAACTCCGACGACGACAACGACAACGACTCCAATTCCAACTCTCCCAGTGATGCTTTGGACCAACCCTTCCCAGTACCTAAATTCCCGGCAGCCATGTGCAAATACGATGTATGGATCTCCGAACCTTCCTCGGTTGCAGAACGCCGGAACCGTCTCCTGCGAGAGATGGGTCTAGCTGGCGACCCGACATTGTCCCGAGGAAAGCCTGCGTTTGCCGCCGATCCTAGAGAAGTGGGCAATGGAGAGTTTAGCCGATCGGCGTCGTCCGATCACTTGAGCCGCCAACAACAGGGAGAGAATTCTGGCTGCACCGCCGGCATATCCCGATCGAAATCAGATGGCGGCGCTGATCGCAGTGACATGGCAGTATGTAGTAGTCAGGCTCATCGTCGTTGTAATAAGTCGTCCTCTTCTTTTTCTTCCTCTTCTTCAATTCTTTCTATTCATTCGGTCGCACCAGAGACTGGCTCGTTTGTAAATAACCGTAATCAAGTTGTCAAGTCAAAGTGCGGTAATGGCAATGGATCCCGGATTGCTAGAGCCGCTGTCCTCAATAAGCCGCCTTCGGGGAAAAATTGTAGAAGGGGGAACGAAATCCGAAGTGGCTCCTCGAACTGGAGCGTGGATTTCGGCCCCTTCTCAGCGGAGCCAGTTTTTGAGAATGCAGTTCGGGGAGAGGTGAGGGAGGGTGCGGAGTGTAATGAGGTTGACATTGCCAATGAACAAATGTGCACCATAAGAGATCTTGATAATGGGAAAGAGTTTGTAGTTAAGGAGATTAGGGAGGACGGGACTTGCAACAAATTAAAGGAAGTGGGAACTGGAAGGCAGTTGACCATGGAGGAATTTCAGATGACAGTGGGGCATTCACCAATTGTTCAAGAATTGATGCGACGGCAAAATGTTGAGGAGGGTAATAAGGACAATGTAGATTCAAATGAAAATGGAAATGGAAATGGCGGTAGTGGATATGATTCCAAGCTGAAGAAGAAAGGGAGTTGGTTTAAAAGTATAAAAAGTGTTGCAAGCACGATGGCGGGTTATAAGGAGAGACGGAGTAGTGAAGAAAGGGACACCTCGTCAGAGAAGGGTGGGCGGAGGTCAAGCTCTGCCACAGATGACAGCCAGGATACTTATTTACATGGGCCTGAAAGAGTAAGGGTTAGGCAATATGGGAAATCATGTAAGGAGTTCACAGCACTTTATAAAAGCCAGGAGATACAGGCGCATAATGGATCTATATGGAGCATTAAGTTTAGTTTGGATGGGAAATATCTTGCTAGTGCAGGTGAGGATTGTATAATTCATGTTTGGCAAGTTGTTGAGTCAGAGAGGAAGGTGGAGATGCTAATGGCGAAACCAGACTATGGGAATATGAATATGTTATTTGTGATGAACGGGTCGCCGGAGCCAACTTTGCTGTCCCCTATCAAGGACGACCATCCAGAGAAGAAGAGAAGGGGGAGGTCATCCATAAGCAGAAAACCACTGAGCTTGGACCAGTTAGTGGTGCCAGAAACTATGTTTGCACTTACTGAAAAACCTATTTGCTCATTTCAAGGCCATCTTGATGATGTGCTTGACCTATCTTGGTCCAAATCTCAGCACTTGCTCTCATCTTCAATGGACAAAACTGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTTTGAAAGTTTTTTCACACAGTGACTATGTGACTTGCATCCAGTTTAATCCTGTTGATGACAGATACTTCATTAGCGGATCTTTGGATTCCAAGGTTCGGATATGGAGCATTCCTGATCGTCAAGTTGTTGATTGGACTGATCTGCATGAGATGGTCACTGCTGCTTGCTATACGCCTGATGGTCAGGGTGCCTTGGTGGGCTCATACAAAGGTAGCTGCCATTTATATAATACATCTGAAAATAAATTGGAACAGAAAAGTCAGATCAATCTACAGAACAAGAAAAAGAAGTCGCATCTCAAGAAAATTACTGGCTTCCAGTTTGCTCCAGGGAGTTCATCAGAATTACTTATCACATCTGCCGATTCACGAATCCGGGTGGTTGATGGTGTTGACCTGGTTCATAAGTTCAAAGGGTTCCGTAACACAAATAGCCAAATTTTAGCCTCCCTCACAGCAAATGGAAAATATATCGTCTCAGCAAGTGAGGATTCCCACGTGTATATATGGAAAAATGAAGCTGACTGCAGGCCCAACAGAACCAAAGGGGTCACTATTACACAGTCATATGAACATTTTCACTGTAGAGATGTGTCGGTGGCCATTCCTTGGCCTGGTTTGGGCGATGCATGTGAAATGCATGATACTTTATCTGGAGAACAAATTGGGGCTGATAATAACCCGGATGGGGTCTCATCGGCGAATCATCCTCCAACTCCTGTAGATGAGTATTTCGGTAGTGAGGGTTCACATTCTGCATCAGGCTGCAACAACAGTCCGCTTTACGGAACCATAGCCAGTGCGACAAACAGTTATTTCTTTGATCGAATTTCTGCGACATGGCCGGAGGAGAAACTTGTTCTTGCTGCGAGAAAACGAAGCCCTCGTGTCAGTGTCGATATCTCTAATGGGGTAAGTCAAAACATGTCAGCATGGGGTCTGGTCATTGTAACTGCCGGCCTCCGAGGGGAAATTCAAGCTTTCCAGAATTTTGGATTGCCACTGCGCATATAG 2775 0.467 MSKAGDEEDEEVCFYESNDRLLSSSCSCSTSNSDDDNDNDSNSNSPSDALDQPFPVPKFPAAMCKYDVWISEPSSVAERRNRLLREMGLAGDPTLSRGKPAFAADPREVGNGEFSRSASSDHLSRQQQGENSGCTAGISRSKSDGGADRSDMAVCSSQAHRRCNKSSSSFSSSSSILSIHSVAPETGSFVNNRNQVVKSKCGNGNGSRIARAAVLNKPPSGKNCRRGNEIRSGSSNWSVDFGPFSAEPVFENAVRGEVREGAECNEVDIANEQMCTIRDLDNGKEFVVKEIREDGTCNKLKEVGTGRQLTMEEFQMTVGHSPIVQELMRRQNVEEGNKDNVDSNENGNGNGGSGYDSKLKKKGSWFKSIKSVASTMAGYKERRSSEERDTSSEKGGRRSSSATDDSQDTYLHGPERVRVRQYGKSCKEFTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHVWQVVESERKVEMLMAKPDYGNMNMLFVMNGSPEPTLLSPIKDDHPEKKRRGRSSISRKPLSLDQLVVPETMFALTEKPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKVFSHSDYVTCIQFNPVDDRYFISGSLDSKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLEQKSQINLQNKKKKSHLKKITGFQFAPGSSSELLITSADSRIRVVDGVDLVHKFKGFRNTNSQILASLTANGKYIVSASEDSHVYIWKNEADCRPNRTKGVTITQSYEHFHCRDVSVAIPWPGLGDACEMHDTLSGEQIGADNNPDGVSSANHPPTPVDEYFGSEGSHSASGCNNSPLYGTIASATNSYFFDRISATWPEEKLVLAARKRSPRVSVDISNGVSQNMSAWGLVIVTAGLRGEIQAFQNFGLPLRI 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0596 924 Gene3D - 531 780 IPR015943 GO:0005515
Bisa12g0596 924 MobiDBLite consensus disorder prediction 504 523 - -
Bisa12g0596 924 Pfam WD domain, G-beta repeat 545 580 IPR001680 GO:0005515
Bisa12g0596 924 Pfam WD domain, G-beta repeat 437 469 IPR001680 GO:0005515
Bisa12g0596 924 Pfam WD domain, G-beta repeat 721 758 IPR001680 GO:0005515
Bisa12g0596 924 Pfam WD domain, G-beta repeat 586 623 IPR001680 GO:0005515
Bisa12g0596 924 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 590 624 - -
Bisa12g0596 924 MobiDBLite consensus disorder prediction 88 153 - -
Bisa12g0596 924 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 550 584 - -
Bisa12g0596 924 MobiDBLite consensus disorder prediction 806 827 - -
Bisa12g0596 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 438 479 IPR001680 GO:0005515
Bisa12g0596 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 590 624 IPR001680 GO:0005515
Bisa12g0596 924 MobiDBLite consensus disorder prediction 20 50 - -
Bisa12g0596 924 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 438 471 - -
Bisa12g0596 924 MobiDBLite consensus disorder prediction 380 401 - -
Bisa12g0596 924 MobiDBLite consensus disorder prediction 113 139 - -
Bisa12g0596 924 MobiDBLite consensus disorder prediction 377 416 - -
Bisa12g0596 924 MobiDBLite consensus disorder prediction 336 357 - -
Bisa12g0596 924 PANTHER WD REPEAT DOMAIN 44 6 921 IPR040324 -
Bisa12g0596 924 Gene3D - 400 481 IPR015943 GO:0005515
Bisa12g0596 924 FunFam WD repeat-containing protein 44 531 797 - -
Bisa12g0596 924 SUPERFAMILY WD40 repeat-like 433 759 IPR036322 GO:0005515
Bisa12g0596 924 MobiDBLite consensus disorder prediction 807 821 - -
Bisa12g0596 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 550 590 IPR001680 GO:0005515
Bisa12g0596 924 MobiDBLite consensus disorder prediction 20 56 - -
Bisa12g0596 924 PRINTS G protein beta WD-40 repeat signature 610 624 IPR020472 -
Bisa12g0596 924 PRINTS G protein beta WD-40 repeat signature 568 582 IPR020472 -
Bisa12g0596 924 PRINTS G protein beta WD-40 repeat signature 457 471 IPR020472 -
Bisa12g0596 924 SMART WD40_4 431 470 IPR001680 GO:0005515
Bisa12g0596 924 SMART WD40_4 543 581 IPR001680 GO:0005515
Bisa12g0596 924 SMART WD40_4 717 758 IPR001680 GO:0005515
Bisa12g0596 924 SMART WD40_4 626 664 IPR001680 GO:0005515
Bisa12g0596 924 SMART WD40_4 584 623 IPR001680 GO:0005515
Bisa12g0596 924 SMART WD40_4 671 716 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0596 Bisa-ChrBisa12 8839063 8844884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0596 548 782 Acyl Lipid Metabolism Gene Families AT3G18860 24.908 4.32e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0596 12 8839063 8844884 Bisa12g0596 12 8839063 8844884 ECH