Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0499 ATGGCGAATCGGAACTTGGAGAAGATGGCATCCATTGATGCCCAGCTCCGACAACTAGTTCCAGCCAAAGTCAGCGAAGATGACAAGCTGATTGAGTACGACGCTCTTCTTCTGGATCGGTTTCTTGATATTCTCCAGGACTTACATGGCGAGGATCTGAAGGAAACGGTTCAAGAAGTATATGAGCTTTCTGCTGAGTACGAAGGAAAGCATGACCCTCAAAAGCTGGAGGAGCTAGGAAATGCAATGACCAGTTTAGATGCTGGGGACTCTATTGTTGTTGCAAAGTCCTTTTCCCACATGCTTAACTTGGCCAACTTAGCTGAGGAGGTCCAGATTGCTCACCGAAGAAGAAACAAGCTGAAAAAAGGGGATTTTGCTGATGAGAACAATGCAACCACTGAATCAGACATTGAAGAAACTCTCAAGAAACTTGTGGTGGAGATGAAGAAGTCCCCTCAGGAAGTTTTTGATGCACTGAAAAACCAGACTGTTGATCTGGTTCTTACAGCCCATCCTACTCAGTCAGTACGTAGATCTTTACTTCAGAAACATGCAAGGGTACGGAATTGTTTAACGCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCTGGAGCTTGATGAGGCCCTACAGAGGGAGATTCAAGCTGCCTTCCGTACAGATGAAATCAGGAGGACCCCTCCAACCCCACAAGATGAGATGAGGGCAGGAATGAGCTACTTCCATGAAACAATCTGGAAGGGTGTCCCCAGATTTCTGCGCCGTGTTGATACAGCTTTGAAGAATATAGGGATTGATGAGCGTGTTCCTCATAATGCTCCAGTTATTCAATTTTCTTCTTGGATGGGTGGTGATCGTGATGGAAATCCTAGAGTAACACCTGAAGTGACAAGAGACGTTTGTTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCCCAGATAGAGGATCTTATGTTTGAGCTGTCTATGTGGCGCTGCAATGATGAGCTACATGTCCGGGCAGATGAAATTCACCTGTCTGCTAAGAAAGATGCAGTTGCAAAACACTACATAGAATTCTGGAAAAAGATTCCCCCAAATGAACCATATCGTGTGGTGTTGGGTGAAGTAAGGGACAGGCTCTATCAAACACGTGAGCGTTCCCGCCATTTGCTTGCTCATGGTCACTCAGACATTCCAGAGGAGGCTACTTTCACCAATGTTGAGGAGTTCTTGGAACCTCTTGAACTCTGCTACCGATCACTCTGTGCTTGTGGTGACCGGGCAATTGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTCTCCACTTTTGGACTGTCACTAGTGAGGCTTGACATCAGGCAAGAGTCAGACCGCCATTCTGATGTGATGGATGCCATTACCAAACATTTGGAAATTGGCTCCTACCATGAATGGTCTGAAGAAAAGCGACAGGAATGGCTTTTGTCTGAACTGAGTGGCAAGCGCCCACTGTTTGGACCTGATCTTCCCACAACTGAAGAAATTAGAGATGTTTTGGACACATTTCATGTTATAGCAGAGCTACCACCAGACAACTTTGGAGCATACATCATATCGATGGCAACTGCACCATCTGATGTGCTTGCAGTCGAGCTTCTGCAGCGAGAATGCCATATCAAGAATCCATTAAGAGTTGTCCCATTGTTTGAGAAGCTTGCAGATTTGGAGGCTGCTCCAGCTGCTTTAGCTCGGTTGTTCTCAGTAGACTGGTACAAGAATCGGATCAACGGGAAGCAAGAAGTCATGATTGGCTATTCAGATTCAGGGAAAGATGCCGGAAGATTCTCTGCAGCATGGCAGCTATATAAAGCTCAAGAGGAACTTATAAAGGTAGCCAAGGAATATGGTGTTAAGCTAACCATGTTTCACGGTCGTGGTGGAACTGTTGGGAGAGGAGGTGGCCCCACCCACCTTGCTATCCTGTCTCAACCTCCCGAGACAATCCATGGATCCCTTCGCGTGACAGTTCAGGGTGAAGTCATTGAGCAATCATTCGGAGAGCAGCACTTATGTTTTAGAACACTTCAGCGTTACACTGCAGCTACACTGGAACATGGAATGCATCCCCCGATTTCTCCCAAACCAGAATGGCGTGCCTTGATGGATGAGATGGCTGTCATTGCTACAGAAGAATACCGATCCGTTGTCTTCAAAGAACCCCGATTTGTTGAGTATTTCCGCCTGGCCACACCAGAGTTGGAGTATGGTCGGATGAACATTGGAAGTCGACCAGCCAAGCGAAGGCCTAGTGGTGGTATTGAAACACTCCGTGCAATACCTTGGATCTTTGCATGGACACAAACAAGGTTTCATCTTCCTGTATGGCTTGGATTTGGGGCAGCATTCAAACATGTTATAGAGAAGGATATGAGGAACCTGCAGATGCTTCGAGACATGTACAATCAATGGCCTTTCTTTAGGGTCACCCTTGACTTAGTTGAAATGGTGTTTGCCAAGGGAGACCCTGGGATTGCTGCTCTATATGATAAGCTCCTTGTTTCACCAGACCTCTGGCCATTTGGAGAGCAATTAAGGTCCAAATATGAAGAAACTAAGAGACTCCTCCTTCAGGTGGCTGGGCACAAGGATCTTCTTGAAGCAGATCCATACTTGAAGCAAAGACTCCGCTTGCGTGATTCTTACATTACTACCCTAAACGTTTGCCAAGCTTACACATTGAAACGCATTCGTGATCCAAGCTTTGACATGAAGGCAAAGGCGCGCCCCCACATGTCGAAAGAGTCTATGGAGGTTAGTAAACCGGCTGATGAACTTGTAACGCTGAACCCCACAAGCGAGTACGCCCCAGGTTTAGAAGACACCCTCATTCTCACGATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA 2910 0.4639 MANRNLEKMASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPQKLEELGNAMTSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFADENNATTESDIEETLKKLVVEMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHARVRNCLTQLYAKDITPDDKLELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPRFLRRVDTALKNIGIDERVPHNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELHVRADEIHLSAKKDAVAKHYIEFWKKIPPNEPYRVVLGEVRDRLYQTRERSRHLLAHGHSDIPEEATFTNVEEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHSDVMDAITKHLEIGSYHEWSEEKRQEWLLSELSGKRPLFGPDLPTTEEIRDVLDTFHVIAELPPDNFGAYIISMATAPSDVLAVELLQRECHIKNPLRVVPLFEKLADLEAAPAALARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMHPPISPKPEWRALMDEMAVIATEEYRSVVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDMRNLQMLRDMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSPDLWPFGEQLRSKYEETKRLLLQVAGHKDLLEADPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPSFDMKAKARPHMSKESMEVSKPADELVTLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0499 969 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Bisa12g0499 969 FunFam Phosphoenolpyruvate carboxylase 1 308 445 - -
Bisa12g0499 969 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 969 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 969 IPR022805 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Bisa12g0499 969 Pfam Phosphoenolpyruvate carboxylase 35 969 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bisa12g0499 969 Coils Coil 104 124 - -
Bisa12g0499 969 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 969 IPR015813 GO:0003824
Bisa12g0499 969 Gene3D Phosphoenolpyruvate/pyruvate domain 308 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0499 Bisa-ChrBisa12 7532854 7538442 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0499 12 7532854 7538442 Bisa02g2869 02 72892090 72905433 CCT
Bisa12g0499 12 7532854 7538442 Bisa12g0499 12 7532854 7538442 ECH