Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2426 ATGTTGGACGGTCGCACCTGTGTGTTTCCAAGGTTGTTTCCTAGCTCTTGCCAGGCAGAGAATAAGTGGTCTTACATGAGCTATCTGCGAGATGTGGACCTTAAAAATGGTAAGTGCTCTTTCGATATTGAAGCTGACGATAGAGCTAAGCAGCCGGACATAAGCCTCAAAAATGGCAAGCGGCCGTTGGATTTCGAAGGCAAGGAGGATGAACCCCAACCAAGGAAATGTATTAAAATATTGGATTCTTGCCAATCAGTTGGAACGGCTGGAATTGTGGGGGAAGAGCAATCTTGTCAGGCTAATGATTCATTGGATTCTTGTTCTGTTATTTCTCAAATGGATCAAAACAACTCCACTATCCTGGAACAGAAATCTTATGAGCCTTCGAGAAGTTGCCAGAGAATTGAAAAGGCTCAGGCTGGGTCTGATCAGCTATCTGATGAACAAGAGCAGCATACTGGAGAAGCATTTGATTCTGGTGTCCGGCAATCAGATGAGCAGCAACAACAGGTTGGAGATTCATCGGATTCAGGTTCTCTTTTGCCTAGTATGAACCGAGACAGCTCAGTCACATGTCTCAGCCGCTGCTCGAGGTCTGATTATGGTTCTCTTGCCTCATTGAATAGGAGCTTTCGTAACTTAATCCGAAGTGGTGAGCTCTACACATGGAGGAGACTGAATGGTATCATTGAACACTGGATTTACTTTTCCTGTGCCCTCCTCGAATGGGAAGCCTATGATCCAATACGCCAACGATGGATGCATCTACCAAGGATGGCTTCCAATGAATGCTTCATGTGTTCAGATAAGGAGTCGCTGGCTGTCGGTACTGAACTTCTTGTATTTGGGAGGGAGATGACCTCTCATGTCATTTACAGATACAGTCTTTTGACAAACTCATGGACATCTGGAATGAGGATGAATGCTCCAAGATGCTTGTTCGGGTCTGCCAGCCTTGGGGAGATAGCAATTTTAGCTGGTGGATGTGATTCAGAGGGGCGCATACTTAGCTCAGCCGAACTATACAATTCTGAGACTCAAACCTGGGAGTTACTCCCAAGCATGAATAAACCCCGGAAAATGTGTTCTGGGGTTTTTATGGATGGAAAGTTTTATGTTATTGGGGGAATTGGAGGAAGTGAATCCAAGCTTCTTACATGTGGTGAGGAGTACAATTTACTGACTAGAACATGGACAGAAATTCCTAACATGTCCCCTGGACGTAGTAATAGAGGGGTTGAAATGCCTGCAACAGCTGAGGCACCTCCTCTTGTTGCTGTTGTAAATGATGAATTGTATGCTGCCAATTATGCTGACATGGAGGTAAAGAAATATGACAAAGAGAGAAAATTGTGGGTTACCATTGGGAGACTGCCTGAGCGAGCAGTCTCAATGAATGGTTGGGGTCTTGCATTCAGGGCTTGTGGAAACCGGCTTATTGTCATCGGTGGACCTAGGACTCACGGCGAGGGTTTTATTGAACTCAACTCATGGGTTCCTAGCGAAGGACCTCCACAATGGAACATGCTTGCCAGAAAACGGTCTGGTAACTTTGTCTATAATTGTGCTGTGATGGGATGCTAA 1587 0.4537 MLDGRTCVFPRLFPSSCQAENKWSYMSYLRDVDLKNGKCSFDIEADDRAKQPDISLKNGKRPLDFEGKEDEPQPRKCIKILDSCQSVGTAGIVGEEQSCQANDSLDSCSVISQMDQNNSTILEQKSYEPSRSCQRIEKAQAGSDQLSDEQEQHTGEAFDSGVRQSDEQQQQVGDSSDSGSLLPSMNRDSSVTCLSRCSRSDYGSLASLNRSFRNLIRSGELYTWRRLNGIIEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGREMTSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILSSAELYNSETQTWELLPSMNKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYNLLTRTWTEIPNMSPGRSNRGVEMPATAEAPPLVAVVNDELYAANYADMEVKKYDKERKLWVTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWNMLARKRSGNFVYNCAVMGC 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2426 528 Gene3D - 228 513 IPR015915 GO:0005515
Bisa11g2426 528 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 170 528 - -
Bisa11g2426 528 MobiDBLite consensus disorder prediction 121 188 - -
Bisa11g2426 528 FunFam F-box/kelch-repeat protein SKIP11 227 513 - -
Bisa11g2426 528 SUPERFAMILY Kelch motif 241 525 IPR015915 GO:0005515
Bisa11g2426 528 SMART kelc_smart 279 322 IPR006652 GO:0005515
Bisa11g2426 528 SMART kelc_smart 371 419 IPR006652 GO:0005515
Bisa11g2426 528 SMART kelc_smart 323 370 IPR006652 GO:0005515
Bisa11g2426 528 Pfam Kelch motif 311 357 IPR006652 GO:0005515
Bisa11g2426 528 Pfam Kelch motif 359 406 IPR006652 GO:0005515
Bisa11g2426 528 MobiDBLite consensus disorder prediction 157 188 - -
Bisa11g2426 528 MobiDBLite consensus disorder prediction 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2426 Bisa-ChrBisa11 48913013 48914599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2426 184 421 EF-hand Containing Proteins AT4G39560 25.523 4.62e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2426 11 48913013 48914599 Bisa11g2426 11 48913013 48914599 ECH