Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2298 ATGTGCTATGCAACTCTAATCCGCTTCCGCCGTTACGCTACTTCGCGTTCTGCATTTCCCCCTTCTCTTTCTCTGCTTCATAACGCTCTGCGCTTGTTCTCCTGCTCCTTTTCCTACTCCTCATCGCAAGTGCCACTTCGAGCATCAGTAGCCATGGTGGCTCATTCCAAAGACGAAGCCTATCTCAGCACAGTCATACCCAAGCGTGTCAAGCTCTTCGAGGCCATCCTAGCTCAGCAACTCGCTCATCGCCAATCTCTCCCCGCAGATCCCATCAAGATTACTTTGCCTGACAAGAGTGTGAGGGAAGGGAAGAAGTGGGTGACCACGCCATTAGATATTGCCAAAGCGATTTCGAAGAATTTGGCTGCCAATGCGTTAATTGCTAAAGTAAATGGAGTCCTATGGGATATGACAAGGCCCTTGGAAGGTGATTGTGAGCTGCAGATTTTCAAATTTGAAGACGACGAAGGACGTGACACTTTCTGGCATTCCAGTGCTCACATTCTTGGGCAGGCCCTTGAAGTGGAGTACGGATGTAAACTCTGCATTGGCCCCTGCACCACTAGAGGAGAGGGATTTTATTATGATGCATTTTATGGTGACTTGAGTTTGAATGATGATCACTTTAAGCAGATTGAGTCAGGGGCATCAAAAGCTGTTGCGGAAAAACAACCGTTTGAACGCATTGAAGTATCAAAGGATCAGGCACTTGAAATGTTCTCTGATAATAAGTTTAAGGTTGAAATCATCAATGATTTGCCTGCAGACAAAACGATCACAGTGTACAGATGTGGTCCCTTGGTTGATTTGTGTCGTGGACCGCATATACCAAACACATCCTTTGTGAAAGCGCTTGCTTGTCTAAAGGCTTCATCAGCATACTGGAGAGGGGACAAAGACCGGGAAAGTTTACAAAGAGTTTATGGGATATCTTATCCTGATCAGAAGAGTTTGAAGGAATATATCCATCGGTTGGAGGAGGCTAAAAAGTACGATCACAGACTGTTGGGTGTTAAACAGGAGCTTATTCTTCATCATGAGTGGAGCCCAGGAAGTTGGTTTTTTCTTCCACATGGTACACGGATTTACAACAAGCTAATGGAGTTTGTTCGAAATCAATATAGAGAAAGAGGATACCAAGAGGTTATATCTCCAAATATATATAATATGGAGCTCTGGGAACAATCTGGACATGCTGCAAACTACAAGGAGAATATGTTTGTCTTTGAAATTGAAAAGCAAGAATTTGGGCTGAAACCAATGAATTGCCCAGGGCACTGCTTGATGTTTAAACACAGAGTTCGCTCTTATAGAGAACTCCCTCTTCGACTGGCTGATTTTGGGGTCTTACATCGGAATGAGGCCAGTGGTGCCCTGAGTGGATTGACACGGGTTAGGAGATTTCAGCAGGATGATGCCCATATCTTCTGCAGGGAGTCTCAGGTAAAGGATGAAGTGAGACATGCCTTGGATTTCATCAATTATGCCTATAACATATTTGGTTTCACCTATGATCTGAAGCTTTCAACGAGGCCAGAGAAATACCTGGGAGATGTAGCAACATGGGAGAAGGCTGAAAGTGCTCTTAAAGAAGCTTTAGATGAGTTTGGGAAGCCTTGGCAGATAAATGAAGGGGATGGTGCATTCTATGGACCAAAAATAGATATCAGTGTATCTGATGCATTGAACAGGAAATTCCAGTGTGCAACTTTGCAGCTTGACTTCCAGCTTCCTGACCGTTTTAAGTTGGAATACTCAGCTGAGGATGAAGCCAAAATTGAAAGACCTGTTATGATACACAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCTATATTATTGGAGCACTACAAGGGCAAATGGCCCTTTTGGCTTAGCCCTCGTCAAGCAATTGTGTGCCCTGTTTCAGAGAAATCGCAGTCTTATGCAATTGAGGTGCGAGATAAGATCCATCAAGCAGGTTATCATGTTGATGCTGATACAACTGATAGGAAGATTCAGAAGAAGGTGCGAGAAGCTCAGTTAGCACAGTACAACTATATATTGGTTGTTGGAGAGGAGGAAGCCAAGACTGGACAGGTTAGCGTACGGATTAGAGATAACTCAGACCATAAGGTTATGAGTATTGAGAGCCTACTCAAACACTTCAGTGATGAAGTTGCAGCTTTCCATTGA 2181 0.4411 MCYATLIRFRRYATSRSAFPPSLSLLHNALRLFSCSFSYSSSQVPLRASVAMVAHSKDEAYLSTVIPKRVKLFEAILAQQLAHRQSLPADPIKITLPDKSVREGKKWVTTPLDIAKAISKNLAANALIAKVNGVLWDMTRPLEGDCELQIFKFEDDEGRDTFWHSSAHILGQALEVEYGCKLCIGPCTTRGEGFYYDAFYGDLSLNDDHFKQIESGASKAVAEKQPFERIEVSKDQALEMFSDNKFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKALACLKASSAYWRGDKDRESLQRVYGISYPDQKSLKEYIHRLEEAKKYDHRLLGVKQELILHHEWSPGSWFFLPHGTRIYNKLMEFVRNQYRERGYQEVISPNIYNMELWEQSGHAANYKENMFVFEIEKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQVKDEVRHALDFINYAYNIFGFTYDLKLSTRPEKYLGDVATWEKAESALKEALDEFGKPWQINEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYAIEVRDKIHQAGYHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVSVRIRDNSDHKVMSIESLLKHFSDEVAAFH 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2298 726 SUPERFAMILY ThrRS/AlaRS common domain 155 331 IPR018163 GO:0000166
Bisa11g2298 726 SUPERFAMILY Class II aaRS ABD-related 617 722 - -
Bisa11g2298 726 SUPERFAMILY Class II aaRS and biotin synthetases 333 616 IPR045864 -
Bisa11g2298 726 CDD TGS_ThrRS 92 157 - -
Bisa11g2298 726 PRINTS Threonyl-tRNA synthetase signature 597 610 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 PRINTS Threonyl-tRNA synthetase signature 553 581 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 PRINTS Threonyl-tRNA synthetase signature 419 447 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 PRINTS Threonyl-tRNA synthetase signature 452 475 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 PRINTS Threonyl-tRNA synthetase signature 624 636 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 CDD ThrRS_core 333 629 IPR033728 -
Bisa11g2298 726 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 358 624 IPR006195 -
Bisa11g2298 726 FunFam Threonine--tRNA ligase, cytoplasmic 90 151 - -
Bisa11g2298 726 Gene3D - 155 312 - -
Bisa11g2298 726 Pfam Anticodon binding domain 631 719 IPR004154 -
Bisa11g2298 726 Gene3D - 622 725 IPR036621 -
Bisa11g2298 726 FunFam Threonine--tRNA ligase mitochondrial 1 623 726 - -
Bisa11g2298 726 FunFam Threonyl-tRNA synthetase, mitochondrial 156 313 - -
Bisa11g2298 726 Gene3D Bira Bifunctional Protein; Domain 2 313 621 IPR045864 -
Bisa11g2298 726 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 410 619 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bisa11g2298 726 Hamap Threonine--tRNA ligase [thrS]. 157 724 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 Gene3D - 90 152 IPR012675 -
Bisa11g2298 726 PANTHER THREONINE-TRNA LIGASE 63 725 - -
Bisa11g2298 726 NCBIfam threonine--tRNA ligase 163 720 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Bisa11g2298 726 ProSiteProfiles TGS domain profile. 90 152 IPR004095 -
Bisa11g2298 726 SUPERFAMILY TGS-like 92 152 IPR012676 -
Bisa11g2298 726 CDD ThrRS_anticodon 629 718 IPR047246 -
Bisa11g2298 726 Pfam TGS domain 92 152 IPR004095 -
Bisa11g2298 726 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 260 309 IPR012947 GO:0004812|GO:0005524|GO:0043039
Bisa11g2298 726 SMART tRNA_SAD_4 260 309 IPR012947 GO:0004812|GO:0005524|GO:0043039
Bisa11g2298 726 FunFam Threonine--tRNA ligase 2, cytoplasmic 315 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2298 Bisa-ChrBisa11 47043384 47054957 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2298 11 47043384 47054957 Bisa11g2298 11 47043384 47054957 ECH